Factsheet for PGSC0003DMT400071057

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g056510.2.1	Tomato	cytosol	93.15	93.15
PGSC0003DMT400037986	Potato	cytosol	63.93	67.31
PGSC0003DMT400037996	Potato	cytosol	67.12	66.82
PGSC0003DMT400079842	Potato	cytosol	67.12	66.22
PGSC0003DMT400001779	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.05	65.9
PGSC0003DMT400079841	Potato	cytosol	65.3	65.0
PGSC0003DMT400038054	Potato	endoplasmic reticulum	64.38	64.38
PGSC0003DMT400054729	Potato	cytosol	64.84	64.25
PGSC0003DMT400037990	Potato	cytosol	64.38	64.09
PGSC0003DMT400079840	Potato	cytosol	59.82	63.59
PGSC0003DMT400071059	Potato	cytosol	63.01	62.73
PGSC0003DMT400079839	Potato	cytosol	63.01	62.73
PGSC0003DMT400037994	Potato	cytosol	61.64	61.36
PGSC0003DMT400020286	Potato	cytosol	56.16	60.29
Bra008357.1-P	Field mustard	cytosol	30.14	57.89
PGSC0003DMT400058268	Potato	cytosol	28.31	56.88
PGSC0003DMT400092412	Potato	cytosol	56.16	56.16
VIT_19s0093g00290.t01	Wine grape	mitochondrion	31.05	53.12
PGSC0003DMT400094585	Potato	cytosol	52.51	52.04
PGSC0003DMT400020098	Potato	cytosol	54.79	47.24
PGSC0003DMT400058271	Potato	cytosol	43.84	41.56
PGSC0003DMT400019934	Potato	cytosol	40.18	40.18
PGSC0003DMT400040670	Potato	cytosol	41.55	39.39
PGSC0003DMT400095775	Potato	cytosol	31.96	36.27
PGSC0003DMT400091065	Potato	cytosol	38.81	26.23

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M1CN56
PFAM:PF02798	PFAM:PF13410	EnsemblPlantsGene:PGSC0003DMG400027636	PGSC:PGSC0003DMG400027636	EnsemblPlants:PGSC0003DMT400071057	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002962908	SEG:seg	:	:	:	:

Description

Glutathione s-transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400027636]

Coordinates

chr7:-:51716843..51718268

Molecular Weight (calculated)

25356.7 Da

IEP (calculated)

5.702

GRAVY (calculated)

-0.248

Length

219 amino acids

Sequence
(BLAST)

001: MGDEVVLLDF WPSPFGMRVR IALKEKGIDY ESKEENLSNK SSLLLKMNPV HKQIPVLIHN GKPICESLII VQYIDEVWKD KGPLLPFDPY ERSHARLWAD
101: YVDKKIYSTG RLVWATKGEV QEAAKKEVID HFKLLETELG DKTFFGGDQF GLVDIALIPF YSWFYALETC GNFSMIHECP KLVGWAKRCM ERESVSTSLP
201: DQYKVYDFIL ELKKKLDLD

Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)

001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE

Arabidopsis Description

GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.