Factsheet for PGSC0003DMT400058268

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45140	Canola	cytosol	56.88	48.82
Os10t0525500-01	Rice	cytosol, plastid	56.88	43.06
Solyc05g026220.1.1	Tomato	cytosol	62.39	42.5
Solyc05g006750.2.1	Tomato	cytosol	81.65	38.86
PGSC0003DMT400019934	Potato	cytosol	63.3	31.51
PGSC0003DMT400058271	Potato	cytosol	66.06	31.17
PGSC0003DMT400040670	Potato	cytosol	64.22	30.3
Os10t0525800-00	Rice	cytosol	60.55	30.28
PGSC0003DMT400095775	Potato	cytosol	50.46	28.5
CDY45138	Canola	cytosol	57.8	28.38
PGSC0003DMT400071057	Potato	cytosol	56.88	28.31
GSMUA_Achr1P03800_001	Banana	cytosol	58.72	28.19
TraesCS5D01G200100.1	Wheat	cytosol	59.63	28.14
TraesCS5B01G192400.1	Wheat	cytosol	59.63	28.14
CDX77247	Canola	cytosol	57.8	28.12
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.88	27.56
TraesCS1B01G194900.1	Wheat	cytosol	59.63	27.43
TraesCS5A01G190900.1	Wheat	cytosol	57.8	27.27
CDY30896	Canola	cytosol	57.8	27.27
GSMUA_Achr5P10340_001	Banana	cytosol	57.8	27.16
EER92034	Sorghum	endoplasmic reticulum	57.8	27.16
AT1G59670.1	Thale cress	cytosol	57.8	27.04
PGSC0003DMT400038054	Potato	endoplasmic reticulum	54.13	26.94
AT1G59700.1	Thale cress	cytosol	57.8	26.92
Bra027840.1-P	Field mustard	cytosol	57.8	26.92
EER92036	Sorghum	cytosol	57.8	26.81
GSMUA_Achr5P10360_001	Banana	cytosol	58.72	26.78
GSMUA_Achr5P10350_001	Banana	cytosol	57.8	26.69
PGSC0003DMT400037996	Potato	cytosol	53.21	26.36
PGSC0003DMT400079841	Potato	cytosol	53.21	26.36
PGSC0003DMT400079839	Potato	cytosol	53.21	26.36
TraesCS1A01G187000.1	Wheat	cytosol	56.88	26.16
PGSC0003DMT400079842	Potato	cytosol	53.21	26.13
CDY30898	Canola	cytosol	55.96	26.07
PGSC0003DMT400037994	Potato	cytosol	52.29	25.91
PGSC0003DMT400071059	Potato	cytosol	52.29	25.91
HORVU5Hr1G058000.8	Barley	cytosol	55.05	25.86
TraesCS1D01G189600.1	Wheat	cytosol	55.96	25.74
EES00905	Sorghum	cytosol	55.96	25.74
EER92035	Sorghum	cytosol	56.88	25.73
HORVU1Hr1G049090.2	Barley	cytosol	55.96	25.63
Os10t0481300-01	Rice	cytosol	47.71	25.49
Os10t0525400-01	Rice	cytosol, plastid	56.88	25.41
PGSC0003DMT400054729	Potato	cytosol	51.38	25.34
PGSC0003DMT400079840	Potato	cytosol	47.71	25.24
PGSC0003DMT400092412	Potato	cytosol	49.54	24.66
PGSC0003DMT400037986	Potato	cytosol	46.79	24.52
PGSC0003DMT400037990	Potato	cytosol	48.62	24.09
Zm00001d027557_P001	Maize	cytosol	55.05	23.62
HORVU1Hr1G049070.1	Barley	cytosol	55.96	23.55
PGSC0003DMT400091065	Potato	cytosol	69.72	23.46
PGSC0003DMT400094585	Potato	cytosol	45.87	22.62
PGSC0003DMT400020286	Potato	cytosol	42.2	22.55
PGSC0003DMT400020098	Potato	cytosol	44.95	19.29
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	50.46	19.03
PGSC0003DMT400001779	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.69	16.18
Bra027842.1-P	Field mustard	cytosol	16.51	11.69

Protein Annotations

EnsemblPlants:PGSC0003DMT400058268	EnsemblPlantsGene:PGSC0003DMG400022623	EntrezGene:107057668	Gene3D:1.20.1050.10	Gene3D:3.40.30.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:Thioredoxin-like_sf	PANTHER:PTHR11260
PANTHER:PTHR11260:SF487	PFAM:PF02798	PFscan:PS50404	PGSC:PGSC0003DMG400022623	RefSeq:XP_015168803.1	SUPFAM:SSF52833
UniParc:UPI000294D637	UniProt:M1C2D8	MapMan:18.8.1.4	:	:	:

Description

Glutathione S-transferase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400022623]

Coordinates

chr5:-:6393508..6393837

Molecular Weight (calculated)

12358.0 Da

IEP (calculated)

5.107

GRAVY (calculated)

0.043

Length

109 amino acids

Sequence
(BLAST)

001: MATGSVKLIG SWASPFVNRV EIALKINSID SELIQENVLN KSELLLKSNP VYKKIPVLIH NEQPICESLV FLQYIDEAWL NGPSILPSDP YDRAIARFWA
101: VYIDEKVKT

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.