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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 4
  • vacuole 5
  • extracellular 4
  • endoplasmic reticulum 5
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, secretory
BaCelLo:cytosol
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400038054
PGSC0003DMT400040670
PGSC0003DMT400058271
PGSC0003DMT400071059

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G17190.1 PGSC0003DMT400040670 AT1G10360.1 21798944
AT1G17190.1 PGSC0003DMT400058271 AT1G10360.1 21798944
AT1G78380.1 PGSC0003DMT400038054 AT1G17190.1 21798944
AT1G78380.1 PGSC0003DMT400071059 AT1G17190.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc07g056490.2.1 Tomato extracellular 95.89 95.89
PGSC0003DMT400071059 Potato cytosol 77.17 76.82
PGSC0003DMT400037996 Potato cytosol 69.86 69.55
PGSC0003DMT400037986 Potato cytosol 65.75 69.23
PGSC0003DMT400079840 Potato cytosol 64.84 68.93
PGSC0003DMT400079842 Potato cytosol 68.04 67.12
PGSC0003DMT400037990 Potato cytosol 67.12 66.82
PGSC0003DMT400037994 Potato cytosol 66.21 65.91
PGSC0003DMT400079841 Potato cytosol 65.75 65.45
PGSC0003DMT400079839 Potato cytosol 65.75 65.45
KRH43843 Soybean cytosol 65.3 65.3
PGSC0003DMT400071057 Potato cytosol 64.38 64.38
Bra003645.1-P Field mustard cytosol 59.82 64.22
CDX79261 Canola cytosol 63.47 63.47
AT1G78380.1 Thale cress cytosol 63.47 63.47
AT1G78360.1 Thale cress endoplasmic reticulum 63.47 63.18
KRH13622 Soybean cytosol 49.32 63.16
Bra003644.1-P Field mustard cytosol 63.01 63.01
CDX68016 Canola cytosol 63.01 63.01
KRH13625 Soybean cytosol 63.01 63.01
PGSC0003DMT400054729 Potato cytosol 63.47 62.9
CDX68017 Canola cytosol 62.1 62.67
KRH02498 Soybean cytosol 62.1 62.39
CDX79260 Canola cytosol 61.64 62.21
VIT_10s0003g04250.t01 Wine grape cytosol 26.94 62.11
KRH13620 Soybean cytosol 62.56 61.99
VIT_19s0093g00400.t01 Wine grape cytosol 62.56 61.99
AT1G78340.1 Thale cress cytosol 61.64 61.93
CDX68018 Canola cytosol 61.64 61.93
VIT_19s0093g00350.t01 Wine grape cytosol 62.1 61.54
AT1G17180.1 Thale cress cytosol 62.1 61.54
Bra003646.1-P Field mustard cytosol 61.19 61.47
PGSC0003DMT400020286 Potato cytosol 57.08 61.27
CDX87452 Canola cytosol 61.19 60.91
Bra035031.1-P Field mustard cytosol 61.19 60.91
CDY26861 Canola cytosol 60.73 60.73
CDX83922 Canola cytosol 60.73 60.73
Bra016615.1-P Field mustard cytosol 60.73 60.73
CDX96787 Canola cytosol 60.73 60.73
CDX79259 Canola cytosol 60.73 60.73
AT1G78370.1 Thale cress cytosol 59.82 60.37
VIT_19s0093g00370.t01 Wine grape cytosol 33.33 60.33
Bra026681.1-P Field mustard cytosol 60.27 60.27
CDY26266 Canola cytosol 60.27 60.27
CDY21758 Canola cytosol 60.27 60.27
Bra026684.1-P Field mustard cytosol 60.27 60.27
Bra025994.1-P Field mustard cytosol 60.27 60.27
CDX81809 Canola cytosol 60.27 60.27
AT1G17170.1 Thale cress cytosol 59.82 60.09
CDX88440 Canola cytosol 60.27 60.0
CDX81808 Canola cytosol 59.82 59.82
Bra026680.1-P Field mustard cytosol 59.82 59.82
CDY14615 Canola cytosol 59.82 59.82
CDY48475 Canola cytosol 46.12 59.76
AT1G17190.1 Thale cress cytosol 59.82 59.55
CDY48476 Canola cytosol 59.36 59.36
CDY21757 Canola cytosol 58.9 58.9
KRH43845 Soybean cytosol 59.36 58.56
CDX81810 Canola cytosol 58.45 58.45
VIT_19s0093g00320.t01 Wine grape cytosol 58.9 58.37
KRH43846 Soybean cytosol 53.88 57.84
CDX88438 Canola cytosol 57.53 57.8
CDX88439 Canola cytosol 57.53 57.8
Bra035029.1-P Field mustard cytosol 57.53 57.8
CDX81807 Canola cytosol 57.08 57.34
Bra025993.1-P Field mustard cytosol 57.53 57.27
Bra025995.1-P Field mustard cytosol 56.16 57.21
PGSC0003DMT400092412 Potato cytosol 57.08 57.08
CDX88441 Canola cytosol 57.53 57.01
Bra026679.1-P Field mustard cytosol 56.62 56.62
CDY21756 Canola cytosol 56.16 56.16
CDY48477 Canola cytosol 48.4 55.5
PGSC0003DMT400001779 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 43.84 55.49
CDY26267 Canola cytosol 54.34 55.35
PGSC0003DMT400058268 Potato cytosol 26.94 54.13
PGSC0003DMT400094585 Potato cytosol 53.88 53.39
AT3G43800.1 Thale cress cytosol 55.25 53.3
CDY12324 Canola cytosol 54.34 52.42
Bra034977.1-P Field mustard cytosol 54.34 52.42
CDX87952 Canola cytosol 54.34 52.42
Bra003648.1-P Field mustard cytosol 31.96 46.98
PGSC0003DMT400020098 Potato cytosol 49.77 42.91
PGSC0003DMT400019934 Potato cytosol 40.18 40.18
PGSC0003DMT400058271 Potato cytosol 38.36 36.36
PGSC0003DMT400040670 Potato cytosol 37.44 35.5
PGSC0003DMT400095775 Potato cytosol 29.68 33.68
CDX68020 Canola cytosol 5.02 30.56
PGSC0003DMT400091065 Potato cytosol 36.99 25.0
Protein Annotations
Gene3D:1.20.1050.10EntrezGene:102602024MapMan:18.8.1.4Gene3D:3.40.30.10ncoils:CoilGO:GO:0003674
GO:GO:0005488GO:GO:0005515InterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045
InterPro:IPR010987UniProt:M1B690PFAM:PF02798PFAM:PF13410EnsemblPlantsGene:PGSC0003DMG400014672PGSC:PGSC0003DMG400014672
EnsemblPlants:PGSC0003DMT400038054PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF479SUPFAM:SSF47616
SUPFAM:SSF52833InterPro:Thioredoxin-like_sfUniParc:UPI000294CBDBRefSeq:XP_006364366.1::
Description
C-7 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400014672]
Coordinates
chr1:-:88271449..88272913
Molecular Weight (calculated)
25457.9 Da
IEP (calculated)
5.473
GRAVY (calculated)
-0.271
Length
219 amino acids
Sequence
(BLAST)
001: MVDEVVLLGT YVSMFAVRVK IALADKGIQY EYKEENLVNK SPLLLQMNPI HKKIPVLIHN GKPICESLII VEYIDEVWKD KSPLLPSDPY KKAQARFWAD
101: YVDKKIYDGG KKIWTTKVED QEAANKEFIE SLKVLEEELG DKPYFDGESF GFVDLALIPY YSWFPAYEKF GKFSIEPECP KFVAWAKRCM QKENVSKYLS
201: DPDKIYDFVV MLRQRMGIA
Best Arabidopsis Sequence Match ( AT1G17180.1 )
(BLAST)
001: MADEVILLDF WPSMFGMRTR IALEEKNVKF DYREQDLWNK SPILLEMNPV HKKIPVLIHN GNPVCESLIQ IEYIDEVWPS KTPLLPSDPY QRAQAKFWGD
101: FIDKKVYASA RLIWGAKGEE HEAGKKEFIE ILKTLESELG DKTYFGGETF GYVDIALIGF YSWFEAYEKF GSFSIEAECP KLIAWGKRCV ERESVAKSLP
201: DSEKIIKFVP ELRKKLGIEI E
Arabidopsis Description
GSTU25Glutathione S-transferase U25 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.