CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26267	Canola	cytosol	92.31	72.56
AT1G17170.1	Thale cress	cytosol	84.62	65.6
CDX81807	Canola	cytosol	79.88	61.93
KRH13622	Soybean	cytosol	57.99	57.31
CDY21758	Canola	cytosol	73.96	57.08
CDX81808	Canola	cytosol	73.37	56.62
CDY48476	Canola	cytosol	72.19	55.71
CDY26266	Canola	cytosol	71.6	55.25
CDX68016	Canola	cytosol	69.23	53.42
CDX79261	Canola	cytosol	69.23	53.42
CDX81810	Canola	cytosol	68.05	52.51
CDY21757	Canola	cytosol	67.46	52.05
CDX81809	Canola	cytosol	67.46	52.05
CDX87452	Canola	cytosol	66.86	51.36
CDX88440	Canola	cytosol	66.27	50.91
CDY26861	Canola	cytosol	65.68	50.68
CDY21756	Canola	cytosol	65.09	50.23
CDY14615	Canola	cytosol	65.09	50.23
CDX88441	Canola	cytosol	65.09	49.77
CDX83922	Canola	cytosol	63.31	48.86
CDX96787	Canola	cytosol	63.31	48.86
CDX68018	Canola	cytosol	62.13	48.17
Solyc12g011310.1.1	Tomato	plastid	62.13	47.95
CDX79260	Canola	cytosol	61.54	47.93
CDX68017	Canola	cytosol	60.95	47.47
CDX79259	Canola	cytosol	60.95	47.03
Solyc07g056490.2.1	Tomato	extracellular	60.35	46.58
PGSC0003DMT400038054	Potato	endoplasmic reticulum	59.76	46.12
PGSC0003DMT400071059	Potato	cytosol	59.76	45.91
CDX88439	Canola	cytosol	59.17	45.87
CDX88438	Canola	cytosol	59.17	45.87
CDX68019	Canola	cytosol	59.17	45.45
KRH02498	Soybean	cytosol	58.58	45.41
KRH43843	Soybean	cytosol	58.58	45.21
CDY25833	Canola	cytosol	59.17	44.64
KRH13625	Soybean	cytosol	57.4	44.29
CDY25831	Canola	cytosol	58.58	44.2
CDY58045	Canola	cytosol	58.58	44.2
VIT_19s0093g00400.t01	Wine grape	cytosol	56.8	43.44
VIT_19s0093g00350.t01	Wine grape	cytosol	56.8	43.44
VIT_19s0093g00320.t01	Wine grape	cytosol	55.62	42.53
CDY48477	Canola	cytosol	47.93	42.41
KRH43845	Soybean	cytosol	55.62	42.34
VIT_19s0093g00370.t01	Wine grape	cytosol	30.18	42.15
KRH13620	Soybean	cytosol	55.03	42.08
CDX79258	Canola	cytosol	27.22	41.07
CDX87952	Canola	cytosol	52.07	38.77
CDY12324	Canola	cytosol	51.48	38.33
KRH43846	Soybean	cytosol	44.97	37.25
CDX68020	Canola	cytosol	7.1	33.33
VIT_10s0003g04250.t01	Wine grape	cytosol	18.34	32.63
CDY45140	Canola	cytosol	23.67	31.5
CDY07793	Canola	cytosol	28.99	30.62
CDY37984	Canola	cytosol	40.83	30.4
CDY37985	Canola	cytosol	40.24	29.96
CDY34896	Canola	cytosol	39.65	29.52
CDX93432	Canola	cytosol	39.65	29.52
CDY45138	Canola	cytosol	37.87	28.83
CDX77247	Canola	cytosol	37.87	28.57
CDY30898	Canola	cytosol	39.05	28.21
CDY30896	Canola	cytosol	37.28	27.27
CDY11636	Canola	mitochondrion	36.69	26.96
CDY56090	Canola	mitochondrion	33.14	26.92
CDY40288	Canola	cytosol, plastid	35.5	26.43
CDY14704	Canola	cytosol	35.5	26.32
CDY16220	Canola	cytosol	34.91	25.99
CDY38773	Canola	cytosol	34.91	25.88
CDY11637	Canola	mitochondrion	34.91	25.88
CDY65968	Canola	cytosol	34.32	25.22
CDY23533	Canola	cytosol	34.32	24.79
CDY48383	Canola	cytosol	34.32	24.79
CDY56091	Canola	cytosol	33.73	24.78
CDY28452	Canola	cytosol	28.4	24.49
CDY11635	Canola	cytosol	33.73	24.36
CDY38775	Canola	cytosol	33.73	24.36
CDY38774	Canola	cytosol	36.09	23.92
CDY25824	Canola	cytosol	28.4	23.88
CDY23534	Canola	cytosol, mitochondrion, plastid	18.34	16.94

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:A0A078IC87	EnsemblPlants:CDY48475	ProteinID:CDY48475
ProteinID:CDY48475.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00091168001	InterPro:GST_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0004EF10AA	:	:	:

Description

BnaC05g13350DBnaC05g13350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IC87]

Coordinates

chrLK032775:+:60303..61147

Molecular Weight (calculated)

19432.3 Da

IEP (calculated)

7.128

GRAVY (calculated)

-0.398

Length

169 amino acids

Sequence
(BLAST)

001: MNPIHKKIPV LIHNGKPVCE SLIQVEYIDE TWPGENPLLP SDPYQRAHAK FWADFIDKKV NVTARRIWAT KGEEKEASKE LIEIFKMLES ELGDKHYFGG
101: ETFGYVDIAL IGFHSWFGVY NKFGNMSIES ECPTLTAWTK RCLHRESVTK TLPKSEKVTT FISQRLGVE

Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)

001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE

Arabidopsis Description

GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.