CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038140.1-P	Field mustard	cytosol	100.0	100.0
CDY25831	Canola	cytosol	98.66	98.66
CDY58045	Canola	cytosol	97.32	97.32
AT1G53680.1	Thale cress	cytosol	91.52	91.52
CDX68016	Canola	cytosol	61.61	63.01
CDY26861	Canola	cytosol	61.61	63.01
CDX79261	Canola	cytosol	61.61	63.01
CDY14615	Canola	cytosol	61.16	62.56
CDX81810	Canola	cytosol	60.27	61.64
CDY21756	Canola	cytosol	59.38	60.73
CDY26267	Canola	cytosol	58.04	60.47
CDY21757	Canola	cytosol	58.93	60.27
CDY21758	Canola	cytosol	58.93	60.27
CDX81808	Canola	cytosol	58.93	60.27
CDY26266	Canola	cytosol	58.48	59.82
CDY48476	Canola	cytosol	58.48	59.82
CDX79260	Canola	cytosol	57.59	59.45
CDY48475	Canola	cytosol	44.64	59.17
CDX68017	Canola	cytosol	57.14	58.99
CDX79258	Canola	cytosol	29.46	58.93
CDX68018	Canola	cytosol	56.7	58.26
CDX81809	Canola	cytosol	56.7	57.99
CDX88441	Canola	cytosol	57.14	57.92
CDX87452	Canola	cytosol	56.25	57.27
CDX79259	Canola	cytosol	55.8	57.08
CDX81807	Canola	cytosol	55.36	56.88
CDX88439	Canola	cytosol	54.91	56.42
CDX88438	Canola	cytosol	54.91	56.42
CDX88440	Canola	cytosol	55.36	56.36
CDX96787	Canola	cytosol	52.68	53.88
CDX83922	Canola	cytosol	52.68	53.88
CDY48477	Canola	cytosol	44.64	52.36
CDX68019	Canola	cytosol	51.34	52.27
CDY45140	Canola	cytosol	29.46	51.97
Solyc12g011320.1.1	Tomato	cytosol	50.0	51.14
CDX87952	Canola	cytosol	48.66	48.02
CDY12324	Canola	cytosol	47.77	47.14
PGSC0003DMT400020098	Potato	cytosol	49.11	43.31
CDY30898	Canola	cytosol	43.75	41.88
CDX68020	Canola	cytosol	6.7	41.67
CDY07793	Canola	cytosol	29.46	41.25
CDX77247	Canola	cytosol	40.18	40.18
CDY45138	Canola	cytosol	39.73	40.09
CDY37984	Canola	cytosol	38.84	38.33
CDY30896	Canola	cytosol	39.29	38.1
CDY37985	Canola	cytosol	38.39	37.89
CDY34896	Canola	cytosol	38.39	37.89
CDX93432	Canola	cytosol	37.95	37.44
CDY56090	Canola	mitochondrion	34.38	37.02
CDY16220	Canola	cytosol	37.5	37.0
CDY14704	Canola	cytosol	37.05	36.4
CDY40288	Canola	cytosol, plastid	36.61	36.12
CDY11636	Canola	mitochondrion	37.05	36.09
CDY38773	Canola	cytosol	35.71	35.09
CDY11637	Canola	mitochondrion	35.71	35.09
CDY65968	Canola	cytosol	34.38	33.48
CDY56091	Canola	cytosol	33.93	33.04
CDY23533	Canola	cytosol	34.38	32.91
CDY48383	Canola	cytosol	34.38	32.91
CDY11635	Canola	cytosol	34.38	32.91
CDY38775	Canola	cytosol	34.38	32.91
CDY38774	Canola	cytosol	37.05	32.55
CDY28452	Canola	cytosol	27.23	31.12
CDY25824	Canola	cytosol	26.34	29.35
CDY23534	Canola	cytosol, mitochondrion, plastid	19.64	24.04

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:A0A078GMJ0	EnsemblPlants:CDY25833	ProteinID:CDY25833
ProteinID:CDY25833.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00033256001	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF02798	PFAM:PF13410
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI00025476E1	SEG:seg	:	:	:

Description

BnaA05g14240DBnaA05g14240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMJ0]

Coordinates

chrLK032181:+:20057..20899

Molecular Weight (calculated)

25444.2 Da

IEP (calculated)

5.067

GRAVY (calculated)

-0.399

Length

224 amino acids

Sequence
(BLAST)

001: MGKENEKVVV LDFWASPYAM RTKIALREKG VEFETQQEDL WSKSELLLKS NPVHKKVPVL IHGGKPVSES LIQVQYIDET WTDAASFLPS DPQARANARF
101: WADFAEKTIS FQGGRKIWGN NKGEEQEKGK KEFLDSLKVL EAELGDKSYF GGETFGYVDI ALVPFYSWFY ALEKCGDFSV EAECPKIVAW GKRCVERDSV
201: AASLPESEKV YQQVLKLRQI FGVE

Best Arabidopsis Sequence Match ( AT1G53680.1 )
(BLAST)

001: MGKENSKVVV LDFWASPYAM RTKVALREKG VEFEVQEEDL WNKSELLLKS NPVHKKVPVL IHNNTPISES LIQVQYIDET WTDAASFLPS DPQSRATARF
101: WADYADKTIS FEGGRKIWGN KKGEEQEKGK KEFLESLKVL EAELGDKSYF GGETFGYVDI TLVPFYSWFY ALEKCGDFSV EAECPKIVAW GKRCVERNSV
201: AATLPESEKV YQQVLKLRQI FGVE

Arabidopsis Description

GSTU28Glutathione S-transferase U28 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.