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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003647.1-P Field mustard cytosol 99.55 99.55
CDX79258 Canola cytosol 46.36 91.07
AT1G78320.1 Thale cress cytosol 86.36 86.36
VIT_19s0015g02560.t01 Wine grape cytosol 39.09 78.18
VIT_19s0015g02830.t01 Wine grape cytosol 39.09 71.67
VIT_00s0240g00020.t01 Wine grape cytosol 38.18 71.19
CDY48476 Canola cytosol 68.18 68.49
CDY26266 Canola cytosol 67.73 68.04
CDY21758 Canola cytosol 67.27 67.58
CDX81808 Canola cytosol 66.36 66.67
CDY26861 Canola cytosol 66.36 66.67
CDX68016 Canola cytosol 65.0 65.3
CDX79261 Canola cytosol 65.0 65.3
CDY14615 Canola cytosol 65.0 65.3
CDX81810 Canola cytosol 64.55 64.84
VIT_19s0015g02880.t01 Wine grape cytosol 60.91 64.42
CDY26267 Canola cytosol 62.73 64.19
VIT_19s0093g00260.t01 Wine grape cytosol 62.73 63.01
VIT_19s0093g00310.t01 Wine grape cytosol 62.73 63.01
CDX81807 Canola cytosol 62.27 62.84
VIT_19s0015g02590.t01 Wine grape cytosol 59.55 62.68
CDY21757 Canola cytosol 62.27 62.56
VIT_19s0093g00110.t01 Wine grape cytosol 62.27 62.56
VIT_19s0015g02680.t01 Wine grape cytosol 62.27 62.56
VIT_19s0015g02700.t01 Wine grape cytosol 62.27 62.56
VIT_00s0240g00050.t01 Wine grape cytosol 61.82 62.1
CDY21756 Canola cytosol 61.82 62.1
VIT_19s0093g00150.t01 Wine grape cytosol 61.82 62.1
CDX81809 Canola cytosol 61.82 62.1
CDX87452 Canola cytosol 61.82 61.82
VIT_19s0015g02890.t01 Wine grape cytosol 61.36 61.64
CDX96787 Canola cytosol 61.36 61.64
CDX83922 Canola cytosol 61.36 61.64
VIT_19s0015g02730.t01 Wine grape cytosol 60.91 61.19
VIT_19s0093g00190.t01 Wine grape cytosol 60.91 61.19
CDX88438 Canola cytosol 60.0 60.55
CDX88439 Canola cytosol 60.0 60.55
CDX68017 Canola cytosol 59.55 60.37
CDX88440 Canola cytosol 60.0 60.0
CDX79260 Canola cytosol 59.09 59.91
CDX88441 Canola cytosol 60.0 59.73
CDY48475 Canola cytosol 45.45 59.17
CDX68018 Canola cytosol 58.18 58.72
VIT_19s0027g00460.t01 Wine grape cytosol 59.09 58.3
CDX79259 Canola cytosol 57.73 57.99
VIT_19s0093g00220.t01 Wine grape cytosol 59.55 57.71
Solyc12g011300.1.1 Tomato cytosol 57.27 57.27
CDY48477 Canola cytosol 49.55 57.07
PGSC0003DMT400054729 Potato cytosol 57.27 57.01
Solyc10g007640.2.1 Tomato cytosol 57.27 57.01
VIT_19s0015g02690.t01 Wine grape cytosol 41.82 56.44
PGSC0003DMT400020286 Potato cytosol 50.91 54.9
VIT_19s0093g00160.t01 Wine grape cytosol 50.45 53.11
PGSC0003DMT400092412 Potato cytosol 52.27 52.51
Solyc10g007620.1.1 Tomato cytosol 51.82 52.05
CDY25833 Canola cytosol 52.27 51.34
CDY58045 Canola cytosol 52.27 51.34
CDY25831 Canola cytosol 51.36 50.45
CDY45140 Canola cytosol 28.64 49.61
CDX87952 Canola cytosol 48.64 47.14
CDY12324 Canola cytosol 47.27 45.81
CDY07793 Canola cytosol 31.82 43.75
VIT_19s0015g02610.t01 Wine grape cytosol 60.45 40.67
CDY45138 Canola cytosol 40.45 40.09
CDX77247 Canola cytosol 40.45 39.73
CDY56090 Canola mitochondrion 37.27 39.42
CDY34896 Canola cytosol 40.45 39.21
CDY11636 Canola mitochondrion 40.91 39.13
CDY14704 Canola cytosol 40.45 39.04
CDY40288 Canola cytosol, plastid 40.0 38.77
CDY37984 Canola cytosol 39.55 38.33
CDY16220 Canola cytosol 39.55 38.33
CDX93432 Canola cytosol 39.55 38.33
CDY37985 Canola cytosol 39.55 38.33
CDY30896 Canola cytosol 40.0 38.1
CDY30898 Canola cytosol 40.0 37.61
CDY65968 Canola cytosol 39.09 37.39
CDY11637 Canola mitochondrion 37.73 36.4
CDY38773 Canola cytosol 37.73 36.4
CDY56091 Canola cytosol 37.73 36.09
CDY11635 Canola cytosol 38.18 35.9
CDY23533 Canola cytosol 38.18 35.9
CDY48383 Canola cytosol 38.18 35.9
CDY38775 Canola cytosol 38.18 35.9
CDY38774 Canola cytosol 40.45 34.9
CDY28452 Canola cytosol 30.91 34.69
CDY25824 Canola cytosol 30.91 33.83
CDX68020 Canola cytosol 5.0 30.56
CDY23534 Canola cytosol, mitochondrion, plastid 23.18 27.87
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10EnsemblPlants:CDX68019ProteinID:CDX68019ProteinID:CDX68019.1
GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00099238001InterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF02798PFAM:PF13410PFscan:PS50404
PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF493SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sf
UniParc:UPI0004EEDA57:::::
Description
BnaA07g20590D
Coordinates
chrLK031787:+:3370138..3371479
Molecular Weight (calculated)
25391.8 Da
IEP (calculated)
6.787
GRAVY (calculated)
-0.286
Length
220 amino acids
Sequence
(BLAST)
001: MAEEVILLDY WSSMFGMRTR IALEEKGVKY RYREEDLSNK SPLLLEMNPI HKKIPVLIHK GKPICESIIQ VQYIDEVWPD TNPILPSDPY HRAQARFWSD
101: YIDKKTAGPC KALQRETGEK QEAAKMEFME VLKNLDSELG DKSFFGGNVF GLVDIAFIGF YSWFRTYEMV ANLSIVAEFP KLIAWAERCL KRESVAKVLP
201: DSDKVLKSVS DYRKNILGIN
Best Arabidopsis Sequence Match ( AT1G78320.1 )
(BLAST)
001: MEEEIILLDY WASMYGMRTR IALEEKKVKY EYREEDLSNK SPLLLQMNPI HKKIPVLIHE GKPICESIIQ VQYIDELWPD TNPILPSDPY QRAQARFWAD
101: YIDKKTYVPC KALWSESGEK QEAAKIEFIE VLKTLDSELG DKYYFGGNEF GLVDIAFIGF YSWFRTYEEV ANLSIVLEFP KLMAWAQRCL KRESVAKALP
201: DSDKVLKSVS DHRKIILGID
Arabidopsis Description
GSTU23Glutathione S-transferase U23 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9F1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.