Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_19s0015g02700.t01 | Wine grape | cytosol | 98.63 | 98.63 |
| VIT_19s0015g02880.t01 | Wine grape | cytosol | 90.41 | 95.19 |
| VIT_19s0015g02730.t01 | Wine grape | cytosol | 94.06 | 94.06 |
| VIT_19s0015g02890.t01 | Wine grape | cytosol | 93.15 | 93.15 |
| VIT_19s0015g02590.t01 | Wine grape | cytosol | 88.58 | 92.82 |
| VIT_19s0093g00110.t01 | Wine grape | cytosol | 92.24 | 92.24 |
| VIT_19s0093g00220.t01 | Wine grape | cytosol | 93.15 | 89.87 |
| VIT_19s0093g00190.t01 | Wine grape | cytosol | 89.5 | 89.5 |
| VIT_19s0093g00310.t01 | Wine grape | cytosol | 89.04 | 89.04 |
| VIT_19s0015g02680.t01 | Wine grape | cytosol | 88.58 | 88.58 |
| VIT_00s0240g00050.t01 | Wine grape | cytosol | 85.84 | 85.84 |
| VIT_19s0015g02560.t01 | Wine grape | cytosol | 42.47 | 84.55 |
| VIT_19s0093g00160.t01 | Wine grape | cytosol | 78.54 | 82.3 |
| VIT_19s0027g00460.t01 | Wine grape | cytosol | 82.65 | 81.17 |
| VIT_19s0015g02830.t01 | Wine grape | cytosol | 43.84 | 80.0 |
| VIT_00s0240g00020.t01 | Wine grape | cytosol | 41.1 | 76.27 |
| VIT_19s0093g00260.t01 | Wine grape | cytosol | 75.34 | 75.34 |
| CDX79258 | Canola | cytosol | 38.36 | 75.0 |
| VIT_10s0003g04250.t01 | Wine grape | cytosol | 29.68 | 68.42 |
| Solyc10g007640.2.1 | Tomato | cytosol | 67.58 | 66.97 |
| PGSC0003DMT400054729 | Potato | cytosol | 67.58 | 66.97 |
| Solyc12g011300.1.1 | Tomato | cytosol | 66.67 | 66.36 |
| VIT_19s0015g02690.t01 | Wine grape | cytosol | 48.86 | 65.64 |
| VIT_19s0093g00350.t01 | Wine grape | cytosol | 66.21 | 65.61 |
| VIT_19s0093g00400.t01 | Wine grape | cytosol | 64.84 | 64.25 |
| PGSC0003DMT400020286 | Potato | cytosol | 59.36 | 63.73 |
| VIT_19s0093g00370.t01 | Wine grape | cytosol | 35.16 | 63.64 |
| VIT_19s0015g02610.t01 | Wine grape | cytosol | 94.06 | 63.0 |
| AT1G78320.1 | Thale cress | cytosol | 63.01 | 62.73 |
| CDX68019 | Canola | cytosol | 62.1 | 61.82 |
| Bra003647.1-P | Field mustard | cytosol | 62.1 | 61.82 |
| VIT_19s0093g00320.t01 | Wine grape | cytosol | 62.1 | 61.54 |
| PGSC0003DMT400092412 | Potato | cytosol | 60.73 | 60.73 |
| Solyc10g007620.1.1 | Tomato | cytosol | 59.82 | 59.82 |
| VIT_04s0079g00360.t01 | Wine grape | cytosol | 57.53 | 57.27 |
| VIT_19s0093g00290.t01 | Wine grape | mitochondrion | 31.96 | 54.69 |
| VIT_01s0026g01340.t01 | Wine grape | cytosol | 43.38 | 40.95 |
| VIT_01s0026g01330.t01 | Wine grape | cytosol | 42.92 | 40.52 |
| VIT_01s0026g01380.t01 | Wine grape | endoplasmic reticulum | 43.84 | 36.78 |
Protein Annotations
| Gene3D:1.20.1050.10 | EntrezGene:100245600 | wikigene:100245600 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | ProteinID:CCB57180 |
| ProteinID:CCB57180.1 | UniProt:F6HR72 | EMBL:FN596009 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004364 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006749 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009407 | GO:GO:0009987 |
| GO:GO:0016740 | GO:GO:0019748 | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 |
| InterPro:IPR010987 | EntrezGene:LOC100245600 | wikigene:LOC100245600 | PFAM:PF02798 | PFAM:PF13410 | PFscan:PS50404 |
| PFscan:PS50405 | PANTHER:PTHR11260 | PANTHER:PTHR11260:SF479 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | TIGR:TC61059 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI00015CCF80 | ArrayExpress:VIT_19s0093g00150 | EnsemblPlantsGene:VIT_19s0093g00150 | EnsemblPlants:VIT_19s0093g00150.t01 | RefSeq:XP_002262767 |
| RefSeq:XP_002262767.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr19:+:16570480..16571868
Molecular Weight (calculated)
25440.9 Da
IEP (calculated)
6.258
GRAVY (calculated)
-0.337
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEIILLDF WPSMFGMRVR LALSEKGLKY EYKEEDLRNK SPLLLEMNPV HKKIPVLIHN GKPICESLLI VQYIDEVWHD KSPLLPSDPY QRAQARFWAD
101: YVDKKLYELG RKIWSTKGEE QETAKKEFIE CLKLLEGELG EKPYFGGEKI GFVDVALVTF SCWFHAYESF GNFSIEAECP KLIAWTKRCM EKESVSSSLE
201: DPHKVHGFVM GMRKKLGIE
101: YVDKKLYELG RKIWSTKGEE QETAKKEFIE CLKLLEGELG EKPYFGGEKI GFVDVALVTF SCWFHAYESF GNFSIEAECP KLIAWTKRCM EKESVSSSLE
201: DPHKVHGFVM GMRKKLGIE
001: MANEVILLDF WPSMFGMRTR IALREKGVEF EYREEDLRNK SPLLLQMNPI HKKIPVLIHN GKPVNESIIQ VQYIDEVWSH KNPILPSDPY LRAQARFWAD
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE
Arabidopsis Description
GSTU19GSTU19 [Source:UniProtKB/TrEMBL;Acc:A0A178W4K6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.