Factsheet for VIT_19s0093g00350.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 5
extracellular 4
endoplasmic reticulum 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0026g01380.t01
VIT_06s0004g05670.t01
VIT_06s0004g05680.t01
VIT_06s0004g05700.t01
VIT_06s0004g05710.t01
VIT_10s0003g04250.t01
VIT_14s0060g02170.t01
VIT_19s0093g00320.t01
VIT_19s0093g00350.t01
VIT_19s0093g00370.t01
VIT_19s0093g00400.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17180.1	VIT_06s0004g05670.t01	AT2G29420.1	21798944
AT1G17180.1	VIT_06s0004g05680.t01	AT2G29420.1	21798944
AT1G17180.1	VIT_06s0004g05700.t01	AT2G29420.1	21798944
AT1G17180.1	VIT_06s0004g05710.t01	AT2G29420.1	21798944
AT1G17180.1	VIT_14s0060g02170.t01	AT2G29420.1	21798944
AT1G17190.1	VIT_01s0026g01380.t01	AT1G10360.1	21798944
AT1G17190.1	VIT_06s0004g05670.t01	AT2G29490.1	21798944
AT1G17190.1	VIT_06s0004g05680.t01	AT2G29490.1	21798944
AT1G17190.1	VIT_06s0004g05700.t01	AT2G29490.1	21798944
AT1G17190.1	VIT_06s0004g05710.t01	AT2G29490.1	21798944
AT1G17190.1	VIT_14s0060g02170.t01	AT2G29490.1	21798944
AT1G78340.1	VIT_06s0004g05670.t01	AT2G29490.1	21798944
AT1G78340.1	VIT_06s0004g05680.t01	AT2G29490.1	21798944
AT1G78340.1	VIT_06s0004g05700.t01	AT2G29490.1	21798944
AT1G78340.1	VIT_06s0004g05710.t01	AT2G29490.1	21798944
AT1G78340.1	VIT_14s0060g02170.t01	AT2G29490.1	21798944
AT1G78380.1	VIT_10s0003g04250.t01	AT1G17190.1	21798944
AT1G78380.1	VIT_19s0093g00320.t01	AT1G17190.1	21798944
AT1G78380.1	VIT_19s0093g00350.t01	AT1G17190.1	21798944
AT1G78380.1	VIT_19s0093g00370.t01	AT1G17190.1	21798944
AT1G78380.1	VIT_19s0093g00400.t01	AT1G17190.1	21798944
AT1G78380.1	VIT_06s0004g05670.t01	AT2G29490.1	21798944
AT1G78380.1	VIT_06s0004g05680.t01	AT2G29490.1	21798944
AT1G78380.1	VIT_06s0004g05700.t01	AT2G29490.1	21798944
AT1G78380.1	VIT_06s0004g05710.t01	AT2G29490.1	21798944
AT1G78380.1	VIT_14s0060g02170.t01	AT2G29490.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0093g00400.t01	Wine grape	cytosol	95.93	95.93
VIT_10s0003g04250.t01	Wine grape	cytosol	33.94	78.95
VIT_19s0093g00320.t01	Wine grape	cytosol	78.28	78.28
VIT_19s0093g00370.t01	Wine grape	cytosol	40.27	73.55
VIT_19s0015g02560.t01	Wine grape	cytosol	35.29	70.91
VIT_19s0015g02880.t01	Wine grape	cytosol	65.16	69.23
VIT_19s0093g00310.t01	Wine grape	cytosol	67.42	68.04
VIT_00s0240g00020.t01	Wine grape	cytosol	36.2	67.8
VIT_19s0015g02890.t01	Wine grape	cytosol	66.97	67.58
VIT_19s0015g02590.t01	Wine grape	cytosol	63.8	67.46
VIT_19s0093g00110.t01	Wine grape	cytosol	66.52	67.12
VIT_19s0015g02830.t01	Wine grape	cytosol	36.2	66.67
VIT_19s0015g02700.t01	Wine grape	cytosol	66.06	66.67
VIT_19s0093g00150.t01	Wine grape	cytosol	65.61	66.21
VIT_19s0015g02730.t01	Wine grape	cytosol	65.16	65.75
VIT_00s0240g00050.t01	Wine grape	cytosol	63.35	63.93
KRH43843	Soybean	cytosol	62.9	63.47
VIT_19s0093g00260.t01	Wine grape	cytosol	62.9	63.47
VIT_19s0093g00190.t01	Wine grape	cytosol	62.9	63.47
VIT_19s0015g02680.t01	Wine grape	cytosol	62.44	63.01
Solyc07g056490.2.1	Tomato	extracellular	61.54	62.1
PGSC0003DMT400038054	Potato	endoplasmic reticulum	61.54	62.1
VIT_19s0027g00460.t01	Wine grape	cytosol	62.44	61.88
VIT_19s0093g00220.t01	Wine grape	cytosol	63.35	61.67
AT1G17180.1	Thale cress	cytosol	61.09	61.09
Solyc12g011310.1.1	Tomato	plastid	60.18	60.73
Bra026681.1-P	Field mustard	cytosol	59.28	59.82
Bra026684.1-P	Field mustard	cytosol	59.28	59.82
CDY21758	Canola	cytosol	59.28	59.82
PGSC0003DMT400071059	Potato	cytosol	59.28	59.55
Bra026680.1-P	Field mustard	cytosol	58.82	59.36
CDX81808	Canola	cytosol	58.82	59.36
AT1G17170.1	Thale cress	cytosol	58.37	59.17
VIT_19s0093g00160.t01	Wine grape	cytosol	55.66	58.85
Bra003645.1-P	Field mustard	cytosol	54.3	58.82
CDX68017	Canola	cytosol	57.47	58.53
KRH13622	Soybean	cytosol	45.25	58.48
CDY21757	Canola	cytosol	57.92	58.45
CDY26266	Canola	cytosol	57.92	58.45
Bra025994.1-P	Field mustard	cytosol	57.92	58.45
CDX87452	Canola	cytosol	57.92	58.18
Bra035031.1-P	Field mustard	cytosol	57.92	58.18
CDX79260	Canola	cytosol	57.01	58.06
CDY48476	Canola	cytosol	57.47	57.99
CDY26861	Canola	cytosol	57.01	57.53
CDX68016	Canola	cytosol	57.01	57.53
Bra003644.1-P	Field mustard	cytosol	57.01	57.53
CDX81810	Canola	cytosol	57.01	57.53
CDX81809	Canola	cytosol	57.01	57.53
KRH02498	Soybean	cytosol	56.56	57.34
CDX88440	Canola	cytosol	57.01	57.27
AT1G78380.1	Thale cress	cytosol	56.56	57.08
Bra016615.1-P	Field mustard	cytosol	56.56	57.08
CDX79261	Canola	cytosol	56.56	57.08
CDX83922	Canola	cytosol	56.56	57.08
CDX96787	Canola	cytosol	56.56	57.08
VIT_19s0015g02690.t01	Wine grape	cytosol	42.08	57.06
CDX81807	Canola	cytosol	56.11	56.88
CDY48475	Canola	cytosol	43.44	56.8
KRH43845	Soybean	cytosol	57.01	56.76
KRH13625	Soybean	cytosol	56.11	56.62
CDY21756	Canola	cytosol	56.11	56.62
CDY14615	Canola	cytosol	56.11	56.62
AT1G17190.1	Thale cress	cytosol	56.11	56.36
AT1G78360.1	Thale cress	endoplasmic reticulum	56.11	56.36
AT1G78370.1	Thale cress	cytosol	55.2	56.22
CDX79259	Canola	cytosol	55.66	56.16
Bra003646.1-P	Field mustard	cytosol	55.2	55.96
Bra025995.1-P	Field mustard	cytosol	54.3	55.81
Bra026679.1-P	Field mustard	cytosol	55.2	55.71
AT1G78340.1	Thale cress	cytosol	54.75	55.5
CDX68018	Canola	cytosol	54.75	55.5
KRH13620	Soybean	cytosol	55.2	55.2
CDY26267	Canola	cytosol	53.39	54.88
CDX88441	Canola	cytosol	54.3	54.3
CDX88438	Canola	cytosol	53.39	54.13
CDX88439	Canola	cytosol	53.39	54.13
Bra035029.1-P	Field mustard	cytosol	53.39	54.13
Bra025993.1-P	Field mustard	cytosol	53.39	53.64
KRH43846	Soybean	cytosol	48.87	52.94
VIT_04s0079g00360.t01	Wine grape	cytosol	51.13	51.36
CDY48477	Canola	cytosol	44.34	51.31
Bra034977.1-P	Field mustard	cytosol	49.77	48.46
CDY12324	Canola	cytosol	49.77	48.46
AT3G43800.1	Thale cress	cytosol	49.32	48.02
CDX87952	Canola	cytosol	49.32	48.02
VIT_19s0093g00290.t01	Wine grape	mitochondrion	27.15	46.88
VIT_19s0015g02610.t01	Wine grape	cytosol	66.06	44.65
Bra003648.1-P	Field mustard	cytosol	28.96	42.95
VIT_01s0026g01340.t01	Wine grape	cytosol	39.82	37.93
VIT_01s0026g01330.t01	Wine grape	cytosol	38.01	36.21
VIT_01s0026g01380.t01	Wine grape	endoplasmic reticulum	37.56	31.8
CDX68020	Canola	cytosol	3.62	22.22

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100254264	wikigene:100254264	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:A5B0N6
EMBL:AM442524	ProteinID:CAN82751	ProteinID:CAN82751.1	ProteinID:CCB57188	ProteinID:CCB57188.1	EMBL:FN596009
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	EntrezGene:LOC100254264	wikigene:LOC100254264
PFAM:PF02798	PFAM:PF13410	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001523F75	ArrayExpress:VIT_19s0093g00350	EnsemblPlantsGene:VIT_19s0093g00350
EnsemblPlants:VIT_19s0093g00350.t01	unigene:Vvi.4524	RefSeq:XP_002264813	RefSeq:XP_002264813.1	:	:

Description

No Description!

Coordinates

chr19:-:17054270..17055458

Molecular Weight (calculated)

25396.8 Da

IEP (calculated)

6.519

GRAVY (calculated)

-0.156

Length

221 amino acids

Sequence
(BLAST)

001: MANSDQIVLL DFFPSVFGIR VRLALAAKGV EYEGKEEDLT GDKSSLLLKM NPVHKKIPVL IHNGKPICES LIIVEYIDEV WKDRCPLLPS DPYQKAQAKF
101: WADFIDKMVY PCSKKLWTAK GAEQEASKKE FLDRIKLLEG ELKSYPYFGG ESLGFLDIAF LPFYSRFYTF EAFGNFSIEA ECPKLVAWGK RCMEEEFVSR
201: SLPHQHKMYD LVVEFTKKVG I

Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)

001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE

Arabidopsis Description

GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.