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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G17170.1 Thale cress cytosol 82.11 82.11
CDY48475 Canola cytosol 61.93 79.88
CDY26267 Canola cytosol 77.52 78.6
CDY48476 Canola cytosol 71.56 71.23
CDY26266 Canola cytosol 71.1 70.78
CDX79258 Canola cytosol 36.24 70.54
CDY21758 Canola cytosol 70.64 70.32
CDX81808 Canola cytosol 70.18 69.86
CDY21757 Canola cytosol 69.27 68.95
CDX81810 Canola cytosol 69.27 68.95
CDY14615 Canola cytosol 68.81 68.49
CDX81809 Canola cytosol 68.81 68.49
CDX68016 Canola cytosol 68.35 68.04
CDX79261 Canola cytosol 68.35 68.04
CDY26861 Canola cytosol 67.89 67.58
CDY21756 Canola cytosol 67.89 67.58
CDX88441 Canola cytosol 67.43 66.52
CDX87452 Canola cytosol 65.6 65.0
CDX88440 Canola cytosol 64.68 64.09
CDX68019 Canola cytosol 62.84 62.27
CDX68018 Canola cytosol 61.93 61.93
CDX79259 Canola cytosol 61.47 61.19
CDX88438 Canola cytosol 61.01 61.01
CDX88439 Canola cytosol 61.01 61.01
Solyc12g011310.1.1 Tomato plastid 60.55 60.27
CDX79260 Canola cytosol 59.63 59.91
CDX83922 Canola cytosol 60.09 59.82
CDX96787 Canola cytosol 60.09 59.82
CDX68017 Canola cytosol 59.17 59.45
KRH43843 Soybean cytosol 59.17 58.9
Solyc07g056490.2.1 Tomato extracellular 58.72 58.45
KRH13625 Soybean cytosol 58.72 58.45
KRH02498 Soybean cytosol 58.26 58.26
VIT_19s0093g00370.t01 Wine grape cytosol 32.11 57.85
PGSC0003DMT400038054 Potato endoplasmic reticulum 57.34 57.08
VIT_10s0003g04250.t01 Wine grape cytosol 24.77 56.84
PGSC0003DMT400071059 Potato cytosol 57.34 56.82
KRH43845 Soybean cytosol 57.8 56.76
KRH13622 Soybean cytosol 44.04 56.14
VIT_19s0093g00350.t01 Wine grape cytosol 56.88 56.11
CDY58045 Canola cytosol 57.34 55.8
VIT_19s0093g00400.t01 Wine grape cytosol 56.42 55.66
CDY25833 Canola cytosol 56.88 55.36
CDY48477 Canola cytosol 48.17 54.97
CDY25831 Canola cytosol 56.42 54.91
KRH13620 Soybean cytosol 55.05 54.3
VIT_19s0093g00320.t01 Wine grape cytosol 53.67 52.94
KRH43846 Soybean cytosol 47.25 50.49
CDY45140 Canola cytosol 29.36 50.39
CDY12324 Canola cytosol 51.38 49.34
CDX87952 Canola cytosol 50.92 48.9
CDY07793 Canola cytosol 30.73 41.88
CDX68020 Canola cytosol 6.88 41.67
CDY45138 Canola cytosol 41.28 40.54
CDX77247 Canola cytosol 41.28 40.18
CDY30898 Canola cytosol 42.66 39.74
CDX93432 Canola cytosol 40.83 39.21
CDY37985 Canola cytosol 40.83 39.21
CDY37984 Canola cytosol 40.83 39.21
CDY16220 Canola cytosol 40.37 38.77
CDY34896 Canola cytosol 39.91 38.33
CDY14704 Canola cytosol 39.91 38.16
CDY30896 Canola cytosol 40.37 38.1
CDY56090 Canola mitochondrion 35.32 37.02
CDY40288 Canola cytosol, plastid 38.53 37.0
CDY65968 Canola cytosol 37.16 35.22
CDY11636 Canola mitochondrion 37.16 35.22
CDY38773 Canola cytosol 36.7 35.09
CDY11637 Canola mitochondrion 36.7 35.09
CDY56091 Canola cytosol 36.7 34.78
CDY28452 Canola cytosol 31.19 34.69
CDY23533 Canola cytosol 37.16 34.62
CDY11635 Canola cytosol 37.16 34.62
CDY48383 Canola cytosol 37.16 34.62
CDY38775 Canola cytosol 37.16 34.62
CDY25824 Canola cytosol 30.73 33.33
CDY38774 Canola cytosol 36.7 31.37
CDY23534 Canola cytosol, mitochondrion, plastid 21.56 25.68
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10EnsemblPlants:CDX81807ProteinID:CDX81807ProteinID:CDX81807.1
ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00136749001InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF02798PFAM:PF13410
PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF479SUPFAM:SSF47616SUPFAM:SSF52833
InterPro:Thioredoxin-like_sfUniParc:UPI0004EEB0A2::::
Description
BnaC08g37940D
Coordinates
chrLK031826:+:884570..885606
Molecular Weight (calculated)
25159.4 Da
IEP (calculated)
5.481
GRAVY (calculated)
-0.302
Length
218 amino acids
Sequence
(BLAST)
001: MADEVVLLDF WASVYGMRTR IALEEKKVKY DYREQDLLNK SALLLEMNPV HKKIPVLVHN GKPVCESLIQ IEYIDETWPG ENPLLPSDPY ERAQAKFWAD
101: FIDKKMSVTA KRVWATKSEE QEASKELIEI LKTLESELGE KHYFGGKTFG FVDIALIGFY SWFGVYEKYG NVSIESECSK LIAWAKRCLQ RDSVTKTLPE
201: LEKLIALISE RRKSLGLE
Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)
001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
Arabidopsis Description
GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.