Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G17180.1 | CDX97887 | AT2G29420.1 | 21798944 |
| AT1G17180.1 | CDY51369 | AT2G29420.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026680.1-P | Field mustard | cytosol | 93.61 | 93.61 |
| CDY21757 | Canola | cytosol | 93.15 | 93.15 |
| CDY21756 | Canola | cytosol | 85.39 | 85.39 |
| CDX81810 | Canola | cytosol | 84.93 | 84.93 |
| CDY21758 | Canola | cytosol | 82.65 | 82.65 |
| CDY48476 | Canola | cytosol | 81.28 | 81.28 |
| CDX81808 | Canola | cytosol | 81.28 | 81.28 |
| CDY26266 | Canola | cytosol | 79.45 | 79.45 |
| AT1G17180.1 | Thale cress | cytosol | 78.54 | 77.83 |
| CDY26861 | Canola | cytosol | 70.32 | 70.32 |
| CDY14615 | Canola | cytosol | 69.86 | 69.86 |
| CDX79258 | Canola | cytosol | 35.62 | 69.64 |
| CDY26267 | Canola | cytosol | 68.04 | 69.3 |
| CDX81807 | Canola | cytosol | 68.49 | 68.81 |
| CDX68016 | Canola | cytosol | 68.04 | 68.04 |
| CDX79261 | Canola | cytosol | 67.58 | 67.58 |
| CDY48475 | Canola | cytosol | 52.05 | 67.46 |
| CDX88441 | Canola | cytosol | 64.38 | 63.8 |
| CDX87452 | Canola | cytosol | 63.47 | 63.18 |
| CDX68018 | Canola | cytosol | 61.64 | 61.93 |
| CDX68019 | Canola | cytosol | 62.1 | 61.82 |
| Solyc12g011310.1.1 | Tomato | plastid | 61.64 | 61.64 |
| CDX88440 | Canola | cytosol | 61.64 | 61.36 |
| CDX79259 | Canola | cytosol | 61.19 | 61.19 |
| CDX96787 | Canola | cytosol | 60.73 | 60.73 |
| CDX83922 | Canola | cytosol | 60.73 | 60.73 |
| PGSC0003DMT400038054 | Potato | endoplasmic reticulum | 60.27 | 60.27 |
| Solyc07g056490.2.1 | Tomato | extracellular | 60.27 | 60.27 |
| CDX79260 | Canola | cytosol | 58.9 | 59.45 |
| CDX68017 | Canola | cytosol | 58.9 | 59.45 |
| KRH13622 | Soybean | cytosol | 46.12 | 59.06 |
| CDX88439 | Canola | cytosol | 58.45 | 58.72 |
| CDX88438 | Canola | cytosol | 58.45 | 58.72 |
| VIT_19s0093g00370.t01 | Wine grape | cytosol | 32.42 | 58.68 |
| VIT_19s0093g00400.t01 | Wine grape | cytosol | 57.99 | 57.47 |
| KRH43843 | Soybean | cytosol | 57.08 | 57.08 |
| VIT_19s0093g00350.t01 | Wine grape | cytosol | 57.53 | 57.01 |
| CDY58045 | Canola | cytosol | 57.99 | 56.7 |
| CDY25833 | Canola | cytosol | 57.99 | 56.7 |
| CDY48477 | Canola | cytosol | 49.32 | 56.54 |
| PGSC0003DMT400071059 | Potato | cytosol | 56.62 | 56.36 |
| KRH43845 | Soybean | cytosol | 57.08 | 56.31 |
| CDY25831 | Canola | cytosol | 57.08 | 55.8 |
| VIT_10s0003g04250.t01 | Wine grape | cytosol | 24.2 | 55.79 |
| VIT_19s0093g00320.t01 | Wine grape | cytosol | 56.16 | 55.66 |
| KRH02498 | Soybean | cytosol | 55.25 | 55.5 |
| KRH13620 | Soybean | cytosol | 54.34 | 53.85 |
| KRH13625 | Soybean | cytosol | 52.97 | 52.97 |
| KRH43846 | Soybean | cytosol | 49.32 | 52.94 |
| CDX87952 | Canola | cytosol | 52.97 | 51.1 |
| CDY12324 | Canola | cytosol | 52.05 | 50.22 |
| CDY45140 | Canola | cytosol | 28.31 | 48.82 |
| CDY07793 | Canola | cytosol | 29.22 | 40.0 |
| CDY30898 | Canola | cytosol | 42.47 | 39.74 |
| CDY45138 | Canola | cytosol | 39.73 | 39.19 |
| CDX77247 | Canola | cytosol | 39.73 | 38.84 |
| CDY30896 | Canola | cytosol | 38.81 | 36.8 |
| CDY34896 | Canola | cytosol | 37.9 | 36.56 |
| CDY37984 | Canola | cytosol | 37.44 | 36.12 |
| CDY56090 | Canola | mitochondrion | 34.25 | 36.06 |
| CDY37985 | Canola | cytosol | 36.99 | 35.68 |
| CDX93432 | Canola | cytosol | 36.53 | 35.24 |
| CDY16220 | Canola | cytosol | 36.07 | 34.8 |
| CDY65968 | Canola | cytosol | 36.53 | 34.78 |
| CDY14704 | Canola | cytosol | 36.07 | 34.65 |
| CDY48383 | Canola | cytosol | 36.99 | 34.62 |
| CDY23533 | Canola | cytosol | 36.99 | 34.62 |
| CDY40288 | Canola | cytosol, plastid | 35.62 | 34.36 |
| CDY56091 | Canola | cytosol | 36.07 | 34.35 |
| CDY11635 | Canola | cytosol | 36.53 | 34.19 |
| CDY38775 | Canola | cytosol | 36.53 | 34.19 |
| CDY11636 | Canola | mitochondrion | 35.62 | 33.91 |
| CDX68020 | Canola | cytosol | 5.48 | 33.33 |
| CDY11637 | Canola | mitochondrion | 34.7 | 33.33 |
| CDY38773 | Canola | cytosol | 34.7 | 33.33 |
| CDY28452 | Canola | cytosol | 27.85 | 31.12 |
| CDY38774 | Canola | cytosol | 35.16 | 30.2 |
| CDY25824 | Canola | cytosol | 27.4 | 29.85 |
| CDY23534 | Canola | cytosol, mitochondrion, plastid | 19.18 | 22.95 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | EnsemblPlants:CDX81809 | ProteinID:CDX81809 | ProteinID:CDX81809.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00136752001 | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf |
| InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF02798 | PFAM:PF13410 | PFscan:PS50404 |
| PFscan:PS50405 | PANTHER:PTHR11260 | PANTHER:PTHR11260:SF479 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI0004EEDF58 | SEG:seg | : | : | : | : |
Description
BnaC08g37920D
Coordinates
chrLK031826:+:902756..903479
Molecular Weight (calculated)
25298.6 Da
IEP (calculated)
4.829
GRAVY (calculated)
-0.274
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDEVILLGY WPSTFGVRTR IALEEKDIKF DYREQDLFNK SSLLLEMNPV HKKIPVLIHN GKPFCESLIQ VEYIDETWPG KIPLLPSDPY QRAQAKFWGD
101: FIDKMVPGLV RLMWGAKEEE QEAGKKEFIE MLKTVESELG DKTYFGGEAF GYVDIALIGY YCWFDAFEKY GNFSIEAQCP KIIAWAKSCI KRDSVAKYLP
201: DSEKVTELVP ELKKKMGIE
101: FIDKMVPGLV RLMWGAKEEE QEAGKKEFIE MLKTVESELG DKTYFGGEAF GYVDIALIGY YCWFDAFEKY GNFSIEAQCP KIIAWAKSCI KRDSVAKYLP
201: DSEKVTELVP ELKKKMGIE
001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
Arabidopsis Description
GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.