Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- vacuole 4
- extracellular 3
- endoplasmic reticulum 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g056490.2.1 | Tomato | extracellular | 64.22 | 63.93 |
| KRH13617 | Soybean | cytosol, nucleus | 63.76 | 63.47 |
| KRH43848 | Soybean | cytosol | 63.3 | 63.01 |
| VIT_10s0003g04250.t01 | Wine grape | cytosol | 27.06 | 62.11 |
| PGSC0003DMT400038054 | Potato | endoplasmic reticulum | 62.39 | 62.1 |
| Solyc12g011310.1.1 | Tomato | plastid | 62.39 | 62.1 |
| KRH13616 | Soybean | cytosol | 61.47 | 62.04 |
| KRH43843 | Soybean | cytosol | 61.47 | 61.19 |
| AT1G17180.1 | Thale cress | cytosol | 61.47 | 60.63 |
| KRG98126 | Soybean | cytosol | 27.52 | 60.61 |
| VIT_19s0093g00370.t01 | Wine grape | cytosol | 33.49 | 60.33 |
| KRH13622 | Soybean | cytosol | 47.25 | 60.23 |
| KRH13620 | Soybean | cytosol | 61.01 | 60.18 |
| AT1G17170.1 | Thale cress | cytosol | 60.09 | 60.09 |
| PGSC0003DMT400071059 | Potato | cytosol | 60.55 | 60.0 |
| KRH43845 | Soybean | cytosol | 60.55 | 59.46 |
| CDX68016 | Canola | cytosol | 59.63 | 59.36 |
| CDX79261 | Canola | cytosol | 59.63 | 59.36 |
| Bra003644.1-P | Field mustard | cytosol | 59.63 | 59.36 |
| Bra025995.1-P | Field mustard | cytosol | 58.26 | 59.07 |
| Bra003645.1-P | Field mustard | cytosol | 55.05 | 58.82 |
| CDX68018 | Canola | cytosol | 58.72 | 58.72 |
| CDY48475 | Canola | cytosol | 45.41 | 58.58 |
| AT1G78380.1 | Thale cress | cytosol | 58.72 | 58.45 |
| Bra003646.1-P | Field mustard | cytosol | 58.26 | 58.26 |
| CDX81807 | Canola | cytosol | 58.26 | 58.26 |
| AT1G78340.1 | Thale cress | cytosol | 58.26 | 58.26 |
| CDY26267 | Canola | cytosol | 57.34 | 58.14 |
| Bra025994.1-P | Field mustard | cytosol | 58.26 | 57.99 |
| CDY26266 | Canola | cytosol | 58.26 | 57.99 |
| Bra035031.1-P | Field mustard | cytosol | 58.26 | 57.73 |
| CDX87452 | Canola | cytosol | 58.26 | 57.73 |
| CDX68017 | Canola | cytosol | 57.34 | 57.6 |
| CDY48476 | Canola | cytosol | 57.8 | 57.53 |
| CDY21758 | Canola | cytosol | 57.8 | 57.53 |
| Bra026684.1-P | Field mustard | cytosol | 57.8 | 57.53 |
| CDX79259 | Canola | cytosol | 57.8 | 57.53 |
| Bra026681.1-P | Field mustard | cytosol | 57.8 | 57.53 |
| CDX79260 | Canola | cytosol | 56.88 | 57.14 |
| Bra026680.1-P | Field mustard | cytosol | 57.34 | 57.08 |
| CDX81810 | Canola | cytosol | 56.88 | 56.62 |
| CDX81808 | Canola | cytosol | 56.88 | 56.62 |
| KRH13625 | Soybean | cytosol | 56.88 | 56.62 |
| VIT_19s0093g00350.t01 | Wine grape | cytosol | 57.34 | 56.56 |
| CDX88441 | Canola | cytosol | 57.34 | 56.56 |
| CDY21757 | Canola | cytosol | 56.42 | 56.16 |
| AT1G78360.1 | Thale cress | endoplasmic reticulum | 56.42 | 55.91 |
| CDY26861 | Canola | cytosol | 55.96 | 55.71 |
| KRH13619 | Soybean | cytosol | 55.96 | 55.71 |
| CDY14615 | Canola | cytosol | 55.96 | 55.71 |
| CDX88440 | Canola | cytosol | 55.96 | 55.45 |
| AT1G78370.1 | Thale cress | cytosol | 55.05 | 55.3 |
| CDX81809 | Canola | cytosol | 55.5 | 55.25 |
| CDX88439 | Canola | cytosol | 55.05 | 55.05 |
| CDX88438 | Canola | cytosol | 55.05 | 55.05 |
| Bra035029.1-P | Field mustard | cytosol | 55.05 | 55.05 |
| CDY21756 | Canola | cytosol | 55.05 | 54.79 |
| VIT_19s0093g00400.t01 | Wine grape | cytosol | 55.5 | 54.75 |
| Bra026679.1-P | Field mustard | cytosol | 54.59 | 54.34 |
| AT1G17190.1 | Thale cress | cytosol | 53.67 | 53.18 |
| KRH43847 | Soybean | cytosol | 50.46 | 53.14 |
| Bra016615.1-P | Field mustard | cytosol | 53.21 | 52.97 |
| CDX96787 | Canola | cytosol | 53.21 | 52.97 |
| CDX83922 | Canola | cytosol | 53.21 | 52.97 |
| KRH30655 | Soybean | cytosol | 53.21 | 52.49 |
| VIT_19s0093g00320.t01 | Wine grape | cytosol | 53.21 | 52.49 |
| KRH13618 | Soybean | extracellular | 52.75 | 52.27 |
| KRH17272 | Soybean | cytosol | 52.75 | 52.04 |
| KRH72918 | Soybean | cytosol | 52.75 | 52.04 |
| KRH43846 | Soybean | cytosol | 48.62 | 51.96 |
| CDX87952 | Canola | cytosol | 52.75 | 50.66 |
| AT3G43800.1 | Thale cress | cytosol | 52.75 | 50.66 |
| CDY12324 | Canola | cytosol | 52.29 | 50.22 |
| Bra034977.1-P | Field mustard | cytosol | 52.29 | 50.22 |
| Bra025993.1-P | Field mustard | cytosol | 50.0 | 49.55 |
| CDY48477 | Canola | cytosol | 42.66 | 48.69 |
| Bra003648.1-P | Field mustard | cytosol | 31.65 | 46.31 |
| KRH43842 | Soybean | cytosol | 32.57 | 46.1 |
| KRH69403 | Soybean | extracellular | 24.31 | 39.55 |
| KRG99195 | Soybean | cytosol | 23.85 | 36.62 |
| CDX68020 | Canola | cytosol | 5.96 | 36.11 |
| KRH69404 | Soybean | nucleus | 37.61 | 35.34 |
| KRH69402 | Soybean | nucleus | 37.61 | 35.34 |
| KRH74742 | Soybean | nucleus | 37.16 | 34.62 |
| KRH74740 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 37.16 | 34.47 |
Protein Annotations
| Gene3D:1.20.1050.10 | EntrezGene:100781460 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | EMBL:ACUP02010309 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_17G042000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004364 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006749 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009407 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019748 |
| InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | UniProt:I1MRZ9 | InterPro:IPR004045 | InterPro:IPR010987 |
| EMBL:KM818465 | EnsemblPlants:KRH02498 | ProteinID:KRH02498 | ProteinID:KRH02498.1 | PFAM:PF02798 | PFAM:PF13410 |
| PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR11260 | PANTHER:PTHR11260:SF479 | SUPFAM:SSF47616 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI000233DF84 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:3118715..3119656
Molecular Weight (calculated)
25360.7 Da
IEP (calculated)
6.373
GRAVY (calculated)
-0.245
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEVVLVNF NLSMFCIRVR IALEEKGVKY EIKEEDLVNT KSALLLQMNP VHKKVPVFIH NGKPISESLI IVEYIDEVWK DKAPLLPTDP YQRAQARFWA
101: DFVNNKVHEV AKRIWTGKVG EHEAEKKELI ENVKQLEEVL GDKPYFGGET FGFVDIALIP FYKWFSSYEK VGNFKLHYPK LIGWANRCLE RESVSKSVSD
201: EKDVYEFVLM YRKLIGVD
101: DFVNNKVHEV AKRIWTGKVG EHEAEKKELI ENVKQLEEVL GDKPYFGGET FGFVDIALIP FYKWFSSYEK VGNFKLHYPK LIGWANRCLE RESVSKSVSD
201: EKDVYEFVLM YRKLIGVD
001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
Arabidopsis Description
GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.