Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G78340.1 | CDY45446 | AT2G29490.1 | 21798944 |
| AT1G78340.1 | CDY53373 | AT2G29490.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003648.1-P | Field mustard | cytosol | 100.0 | 24.16 |
| CDX68018 | Canola | cytosol | 88.89 | 14.68 |
| CDX79259 | Canola | cytosol | 88.89 | 14.61 |
| AT1G78340.1 | Thale cress | cytosol | 69.44 | 11.47 |
| CDX88439 | Canola | cytosol | 63.89 | 10.55 |
| CDX88438 | Canola | cytosol | 63.89 | 10.55 |
| CDX68016 | Canola | cytosol | 52.78 | 8.68 |
| CDX79261 | Canola | cytosol | 52.78 | 8.68 |
| CDX88441 | Canola | cytosol | 47.22 | 7.69 |
| CDY48477 | Canola | cytosol | 38.89 | 7.33 |
| CDY14615 | Canola | cytosol | 44.44 | 7.31 |
| CDX88440 | Canola | cytosol | 44.44 | 7.27 |
| CDY48475 | Canola | cytosol | 33.33 | 7.1 |
| CDX79260 | Canola | cytosol | 41.67 | 6.91 |
| CDX68017 | Canola | cytosol | 41.67 | 6.91 |
| CDX81807 | Canola | cytosol | 41.67 | 6.88 |
| CDY26861 | Canola | cytosol | 41.67 | 6.85 |
| CDX81810 | Canola | cytosol | 41.67 | 6.85 |
| CDY21756 | Canola | cytosol | 41.67 | 6.85 |
| CDX87452 | Canola | cytosol | 41.67 | 6.82 |
| CDY25831 | Canola | cytosol | 41.67 | 6.7 |
| CDY58045 | Canola | cytosol | 41.67 | 6.7 |
| CDY25833 | Canola | cytosol | 41.67 | 6.7 |
| KRH13622 | Soybean | cytosol | 30.56 | 6.43 |
| CDX81808 | Canola | cytosol | 38.89 | 6.39 |
| CDY26266 | Canola | cytosol | 38.89 | 6.39 |
| CDY21757 | Canola | cytosol | 38.89 | 6.39 |
| KRH02498 | Soybean | cytosol | 36.11 | 5.96 |
| CDX96787 | Canola | cytosol | 36.11 | 5.94 |
| CDY48476 | Canola | cytosol | 36.11 | 5.94 |
| CDX83922 | Canola | cytosol | 36.11 | 5.94 |
| CDY21758 | Canola | cytosol | 36.11 | 5.94 |
| PGSC0003DMT400071059 | Potato | cytosol | 36.11 | 5.91 |
| CDY26267 | Canola | cytosol | 33.33 | 5.58 |
| CDX81809 | Canola | cytosol | 33.33 | 5.48 |
| KRH43843 | Soybean | cytosol | 30.56 | 5.02 |
| PGSC0003DMT400038054 | Potato | endoplasmic reticulum | 30.56 | 5.02 |
| CDX68019 | Canola | cytosol | 30.56 | 5.0 |
| CDY23534 | Canola | cytosol, mitochondrion, plastid | 25.0 | 4.92 |
| CDY28452 | Canola | cytosol | 25.0 | 4.59 |
| KRH13625 | Soybean | cytosol | 27.78 | 4.57 |
| Solyc07g056490.2.1 | Tomato | extracellular | 27.78 | 4.57 |
| VIT_19s0093g00320.t01 | Wine grape | cytosol | 27.78 | 4.52 |
| KRH43845 | Soybean | cytosol | 27.78 | 4.5 |
| CDY25824 | Canola | cytosol | 25.0 | 4.48 |
| CDX93432 | Canola | cytosol | 27.78 | 4.41 |
| CDY37984 | Canola | cytosol | 27.78 | 4.41 |
| CDY37985 | Canola | cytosol | 27.78 | 4.41 |
| CDY65968 | Canola | cytosol | 27.78 | 4.35 |
| CDY56091 | Canola | cytosol | 27.78 | 4.35 |
| CDY23533 | Canola | cytosol | 27.78 | 4.27 |
| CDY38775 | Canola | cytosol | 27.78 | 4.27 |
| CDY11635 | Canola | cytosol | 27.78 | 4.27 |
| CDY48383 | Canola | cytosol | 27.78 | 4.27 |
| Solyc12g011310.1.1 | Tomato | plastid | 25.0 | 4.11 |
| VIT_19s0093g00400.t01 | Wine grape | cytosol | 25.0 | 4.07 |
| CDY45138 | Canola | cytosol | 25.0 | 4.05 |
| CDX77247 | Canola | cytosol | 25.0 | 4.02 |
| CDY12324 | Canola | cytosol | 25.0 | 3.96 |
| CDY40288 | Canola | cytosol, plastid | 25.0 | 3.96 |
| CDX87952 | Canola | cytosol | 25.0 | 3.96 |
| CDY34896 | Canola | cytosol | 25.0 | 3.96 |
| CDY11636 | Canola | mitochondrion | 25.0 | 3.91 |
| CDY30898 | Canola | cytosol | 25.0 | 3.85 |
| KRH13620 | Soybean | cytosol | 22.22 | 3.62 |
| VIT_19s0093g00350.t01 | Wine grape | cytosol | 22.22 | 3.62 |
| CDY38774 | Canola | cytosol | 25.0 | 3.53 |
| CDY16220 | Canola | cytosol | 22.22 | 3.52 |
| CDY38773 | Canola | cytosol | 22.22 | 3.51 |
| CDY14704 | Canola | cytosol | 22.22 | 3.51 |
| CDY11637 | Canola | mitochondrion | 22.22 | 3.51 |
| CDY30896 | Canola | cytosol | 22.22 | 3.46 |
| KRH43846 | Soybean | cytosol | 19.44 | 3.43 |
| CDY56090 | Canola | mitochondrion | 16.67 | 2.88 |
| VIT_19s0093g00370.t01 | Wine grape | cytosol | 5.56 | 1.65 |
| CDY45140 | Canola | cytosol | 2.78 | 0.79 |
| VIT_10s0003g04250.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| CDX79258 | Canola | cytosol | 0.0 | 0.0 |
| CDY07793 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX68020 | EnsemblPlantsGene:GSBRNA2T00099239001 | ProteinID:CDX68020 | ProteinID:CDX68020.1 | UniParc:UPI0004EEC930 | MapMan:35.2 |
Description
BnaA07g20600D
Coordinates
chrLK031787:-:3372229..3372339
Molecular Weight (calculated)
4243.3 Da
IEP (calculated)
10.137
GRAVY (calculated)
0.050
Length
36 amino acids
Sequence
(BLAST)
(BLAST)
1: MALAKRCLQR DSVVNSFPNP ERIVEFAFKI RKIYCV
001: MADEVILLDF WPSPFGVRAR IALREKGVEF EYREENLRDK SPLLLQMNPV HKKIPVLIHN GKPVCESMNV VQYIDEVWSD KNPILPSDPY QRAQARFWVD
101: FVDTKLFEPA DKIWQTKGEE QETAKKEYIE ALKILETELG DKPYFGGDTF GFVDIAMTGY YSWFEASEKL ANFSIEPECP TLMASAKRCL QRESVVQSLH
201: DSEKILAFAY KIRKIYCV
101: FVDTKLFEPA DKIWQTKGEE QETAKKEYIE ALKILETELG DKPYFGGDTF GFVDIAMTGY YSWFEASEKL ANFSIEPECP TLMASAKRCL QRESVVQSLH
201: DSEKILAFAY KIRKIYCV
Arabidopsis Description
GSTU22Glutathione S-transferase U22 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYM1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.