Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY45446
CDY53373

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G78340.1 CDY45446 AT2G29490.1 21798944
AT1G78340.1 CDY53373 AT2G29490.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003646.1-P Field mustard cytosol 98.62 98.62
CDX79259 Canola cytosol 97.71 97.26
AT1G78340.1 Thale cress cytosol 90.37 90.37
CDX68020 Canola cytosol 14.68 88.89
CDX88439 Canola cytosol 83.49 83.49
CDX88438 Canola cytosol 83.49 83.49
CDX68016 Canola cytosol 73.85 73.52
CDX79261 Canola cytosol 73.85 73.52
CDX79258 Canola cytosol 36.7 71.43
CDY26861 Canola cytosol 70.18 69.86
CDY14615 Canola cytosol 69.72 69.41
CDX79260 Canola cytosol 65.6 65.9
CDY21758 Canola cytosol 66.06 65.75
CDX68017 Canola cytosol 65.14 65.44
CDX81808 Canola cytosol 65.14 64.84
CDX87452 Canola cytosol 65.14 64.55
CDX88440 Canola cytosol 65.14 64.55
CDY26266 Canola cytosol 64.22 63.93
CDX88441 Canola cytosol 64.22 63.35
CDY48476 Canola cytosol 63.3 63.01
CDY21757 Canola cytosol 63.3 63.01
CDX81810 Canola cytosol 63.3 63.01
VIT_19s0093g00370.t01 Wine grape cytosol 34.86 62.81
Solyc07g056490.2.1 Tomato extracellular 62.84 62.56
CDY48475 Canola cytosol 48.17 62.13
CDX81807 Canola cytosol 61.93 61.93
PGSC0003DMT400038054 Potato endoplasmic reticulum 61.93 61.64
CDY21756 Canola cytosol 61.93 61.64
CDX81809 Canola cytosol 61.93 61.64
KRH43843 Soybean cytosol 61.47 61.19
CDY26267 Canola cytosol 60.09 60.93
CDX96787 Canola cytosol 60.55 60.27
CDX83922 Canola cytosol 60.55 60.27
VIT_10s0003g04250.t01 Wine grape cytosol 26.15 60.0
PGSC0003DMT400071059 Potato cytosol 59.63 59.09
Solyc12g011310.1.1 Tomato plastid 59.17 58.9
KRH02498 Soybean cytosol 58.72 58.72
CDX68019 Canola cytosol 58.72 58.18
KRH13625 Soybean cytosol 58.26 57.99
KRH13622 Soybean cytosol 45.41 57.89
CDY48477 Canola cytosol 50.46 57.59
CDY58045 Canola cytosol 58.72 57.14
CDY25833 Canola cytosol 58.26 56.7
CDY25831 Canola cytosol 57.8 56.25
KRH43845 Soybean cytosol 56.88 55.86
VIT_19s0093g00350.t01 Wine grape cytosol 55.5 54.75
VIT_19s0093g00400.t01 Wine grape cytosol 55.05 54.3
VIT_19s0093g00320.t01 Wine grape cytosol 53.67 52.94
CDY45140 Canola cytosol 29.82 51.18
KRH13620 Soybean cytosol 51.38 50.68
CDX87952 Canola cytosol 51.83 49.78
CDY12324 Canola cytosol 51.83 49.78
KRH43846 Soybean cytosol 44.5 47.55
CDY07793 Canola cytosol 30.73 41.88
CDY45138 Canola cytosol 41.74 40.99
CDX77247 Canola cytosol 41.74 40.62
CDY30898 Canola cytosol 43.58 40.6
CDY34896 Canola cytosol 41.28 39.65
CDX93432 Canola cytosol 41.28 39.65
CDY56090 Canola mitochondrion 37.61 39.42
CDY37985 Canola cytosol 40.83 39.21
CDY37984 Canola cytosol 40.83 39.21
CDY40288 Canola cytosol, plastid 40.37 38.77
CDY30896 Canola cytosol 40.83 38.53
CDY16220 Canola cytosol 39.91 38.33
CDY11636 Canola mitochondrion 40.37 38.26
CDY65968 Canola cytosol 39.45 37.39
CDY14704 Canola cytosol 38.99 37.28
CDY11637 Canola mitochondrion 38.99 37.28
CDY38773 Canola cytosol 38.99 37.28
CDY11635 Canola cytosol 39.91 37.18
CDY38775 Canola cytosol 39.91 37.18
CDY56091 Canola cytosol 38.99 36.96
CDY23533 Canola cytosol 38.99 36.32
CDY48383 Canola cytosol 38.99 36.32
CDY28452 Canola cytosol 32.57 36.22
CDY25824 Canola cytosol 32.57 35.32
CDY38774 Canola cytosol 39.91 34.12
CDY23534 Canola cytosol, mitochondrion, plastid 23.39 27.87
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10EnsemblPlants:CDX68018ProteinID:CDX68018ProteinID:CDX68018.1
GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00099237001InterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF02798PFAM:PF13410PFscan:PS50404
PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF479SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sf
UniParc:UPI0004EEA79E:::::
Description
BnaA07g20580D
Coordinates
chrLK031787:+:3368245..3369414
Molecular Weight (calculated)
25303.4 Da
IEP (calculated)
4.829
GRAVY (calculated)
-0.355
Length
218 amino acids
Sequence
(BLAST)
001: MADEVILLDF WPSPFGVRAR IALREKGVEF EYREENLREK SPLLLQMNPV HKKIPVLIHN GKPVCESMNV VQYIDEVWSD KNPLLPSDPY QRAQARFWVD
101: FIDTKVYEPA DKIWSTKGEV QEKAKKEYIE ALKILESELG DKPYFEGDTF GFVDIAMTGY YMWFEASEKC GNFSIEPECP TLMASAKRCL QRDSVVNSVP
201: DPEKIVEFAF KIRKIYCV
Best Arabidopsis Sequence Match ( AT1G78340.1 )
(BLAST)
001: MADEVILLDF WPSPFGVRAR IALREKGVEF EYREENLRDK SPLLLQMNPV HKKIPVLIHN GKPVCESMNV VQYIDEVWSD KNPILPSDPY QRAQARFWVD
101: FVDTKLFEPA DKIWQTKGEE QETAKKEYIE ALKILETELG DKPYFGGDTF GFVDIAMTGY YSWFEASEKL ANFSIEPECP TLMASAKRCL QRESVVQSLH
201: DSEKILAFAY KIRKIYCV
Arabidopsis Description
GSTU22Glutathione S-transferase U22 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYM1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.