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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY07793
CDY34896
CDY45446
CDY53373

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G17190.1 CDY07793 AT1G10360.1 21798944
AT1G17190.1 CDY34896 AT1G10360.1 21798944
AT1G17190.1 CDY45446 AT2G29490.1 21798944
AT1G17190.1 CDY53373 AT2G29490.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025993.1-P Field mustard cytosol 97.38 84.55
CDX96787 Canola cytosol 86.91 75.8
CDX83922 Canola cytosol 86.91 75.8
AT1G17190.1 Thale cress cytosol 81.68 70.91
CDY48476 Canola cytosol 62.3 54.34
CDY26266 Canola cytosol 61.78 53.88
CDX68016 Canola cytosol 61.26 53.42
CDX79261 Canola cytosol 60.73 52.97
CDY14615 Canola cytosol 60.21 52.51
CDY26861 Canola cytosol 59.69 52.05
CDY21758 Canola cytosol 59.16 51.6
CDX81808 Canola cytosol 59.16 51.6
CDX88439 Canola cytosol 58.12 50.92
CDX88438 Canola cytosol 58.12 50.92
CDX68017 Canola cytosol 57.59 50.69
CDX68018 Canola cytosol 57.59 50.46
CDX87452 Canola cytosol 58.12 50.45
CDX79260 Canola cytosol 57.07 50.23
CDY21757 Canola cytosol 57.59 50.23
CDX81810 Canola cytosol 57.07 49.77
CDX79259 Canola cytosol 57.07 49.77
CDY26267 Canola cytosol 56.02 49.77
CDX68019 Canola cytosol 57.07 49.55
Solyc07g056490.2.1 Tomato extracellular 56.54 49.32
CDX81809 Canola cytosol 56.54 49.32
CDX79258 Canola cytosol 28.8 49.11
CDY21756 Canola cytosol 56.02 48.86
CDX88440 Canola cytosol 56.02 48.64
CDX88441 Canola cytosol 56.02 48.42
PGSC0003DMT400038054 Potato endoplasmic reticulum 55.5 48.4
CDX81807 Canola cytosol 54.97 48.17
Solyc12g011310.1.1 Tomato plastid 54.97 47.95
CDY48475 Canola cytosol 42.41 47.93
KRH43843 Soybean cytosol 53.93 47.03
PGSC0003DMT400071059 Potato cytosol 53.93 46.82
KRH13625 Soybean cytosol 51.83 45.21
KRH13620 Soybean cytosol 51.83 44.8
CDY25833 Canola cytosol 52.36 44.64
VIT_19s0093g00350.t01 Wine grape cytosol 51.31 44.34
VIT_10s0003g04250.t01 Wine grape cytosol 21.99 44.21
CDY58045 Canola cytosol 51.83 44.2
KRH43845 Soybean cytosol 51.31 44.14
VIT_19s0093g00400.t01 Wine grape cytosol 50.79 43.89
CDY25831 Canola cytosol 51.31 43.75
KRH13622 Soybean cytosol 38.74 43.27
KRH02498 Soybean cytosol 48.69 42.66
VIT_19s0093g00320.t01 Wine grape cytosol 48.17 41.63
KRH43846 Soybean cytosol 42.93 40.2
CDY12324 Canola cytosol 47.12 39.65
CDX87952 Canola cytosol 47.12 39.65
CDX68020 Canola cytosol 7.33 38.89
VIT_19s0093g00370.t01 Wine grape cytosol 23.04 36.36
CDY45140 Canola cytosol 21.47 32.28
CDY30898 Canola cytosol 35.6 29.06
CDY45138 Canola cytosol 33.51 28.83
CDY07793 Canola cytosol 24.08 28.75
CDY34896 Canola cytosol 34.03 28.63
CDX77247 Canola cytosol 33.51 28.57
CDY11636 Canola mitochondrion 34.03 28.26
CDY56090 Canola mitochondrion 30.37 27.88
CDY56091 Canola cytosol 33.51 27.83
CDY65968 Canola cytosol 33.51 27.83
CDY38775 Canola cytosol 34.03 27.78
CDY11635 Canola cytosol 34.03 27.78
CDY23533 Canola cytosol 33.51 27.35
CDY48383 Canola cytosol 33.51 27.35
CDY30896 Canola cytosol 32.98 27.27
CDY40288 Canola cytosol, plastid 31.94 26.87
CDX93432 Canola cytosol 31.94 26.87
CDY37984 Canola cytosol 31.94 26.87
CDY37985 Canola cytosol 31.41 26.43
CDY14704 Canola cytosol 31.41 26.32
CDY16220 Canola cytosol 30.89 25.99
CDY23534 Canola cytosol, mitochondrion, plastid 24.61 25.68
CDY38774 Canola cytosol 33.51 25.1
CDY11637 Canola mitochondrion 29.84 25.0
CDY38773 Canola cytosol 29.84 25.0
CDY28452 Canola cytosol 23.56 22.96
CDY25824 Canola cytosol 23.56 22.39
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10UniProt:A0A078IEN8EnsemblPlants:CDY48477ProteinID:CDY48477
ProteinID:CDY48477.1GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00091170001InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF02798PFAM:PF13410
PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF479SUPFAM:SSF47616SUPFAM:SSF52833
InterPro:Thioredoxin-like_sfUniParc:UPI0004EED6CB::::
Description
BnaC05g13370DBnaC05g13370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEN8]
Coordinates
chrLK032775:+:65103..65889
Molecular Weight (calculated)
22061.5 Da
IEP (calculated)
4.777
GRAVY (calculated)
-0.269
Length
191 amino acids
Sequence
(BLAST)
001: MADEVILLDY WPSMFGMGTT KIALAEKGVA YEYKETDPRA KTSLLIETNP IHKKIPVLIH KGKQICEPLI QLEYIDEFYD PSWKVWGTTG EEQVTAKKEL
101: LEHFKTLETE LGDKTYYGGD VFGFVDIALM GYYSWFKAIE KFGEFSIEAE FPKLTQWTKR CLERESVVMS IADSDKIVEY AYVLRRKLGA E
Best Arabidopsis Sequence Match ( AT1G17190.1 )
(BLAST)
001: MANDQVILLD YWPSMFGMRT KMALAEKGVK YEYKETDPWV KTPLLIEMNP IHKKIPVLIH NGKPICESLI QLEYIDEVWS DASPILPSDP YQKSRARFWA
101: EFIDKKFYDP SWKVWATMGE EHAAVKKELL EHFKTLETEL GDKPYYGGEV FGYLDIALMG YYSWFKAMEK FGEFSIETEF PILTTWTKRC LERESVVKAL
201: ADSDRIIEYV YVLRKKFGAA
Arabidopsis Description
GSTU26Glutathione S-transferase U26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.