Skip to main content
crop-pal logo
Potato
Search for another protein from :
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • vacuole 4
  • extracellular 3
  • endoplasmic reticulum 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:cytosol
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400038054
PGSC0003DMT400040670
PGSC0003DMT400058271
PGSC0003DMT400071059

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G17190.1 PGSC0003DMT400040670 AT1G10360.1 21798944
AT1G17190.1 PGSC0003DMT400058271 AT1G10360.1 21798944
AT1G78380.1 PGSC0003DMT400038054 AT1G17190.1 21798944
AT1G78380.1 PGSC0003DMT400071059 AT1G17190.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400038054 Potato endoplasmic reticulum 76.82 77.17
PGSC0003DMT400037986 Potato cytosol 64.55 68.27
PGSC0003DMT400037996 Potato cytosol 67.27 67.27
PGSC0003DMT400079840 Potato cytosol 62.73 66.99
PGSC0003DMT400037990 Potato cytosol 66.82 66.82
PGSC0003DMT400079841 Potato cytosol 66.82 66.82
PGSC0003DMT400079842 Potato cytosol 67.27 66.67
VIT_10s0003g04250.t01 Wine grape cytosol 28.64 66.32
PGSC0003DMT400079839 Potato cytosol 65.91 65.91
PGSC0003DMT400037994 Potato cytosol 64.09 64.09
KRH43843 Soybean cytosol 63.18 63.47
PGSC0003DMT400071057 Potato cytosol 62.73 63.01
KRH13625 Soybean cytosol 62.73 63.01
Bra003644.1-P Field mustard cytosol 62.27 62.56
CDX68016 Canola cytosol 62.27 62.56
CDX79261 Canola cytosol 61.82 62.1
AT1G78380.1 Thale cress cytosol 61.82 62.1
PGSC0003DMT400054729 Potato cytosol 62.27 61.99
VIT_19s0093g00370.t01 Wine grape cytosol 34.09 61.98
AT1G17170.1 Thale cress cytosol 61.36 61.93
CDY14615 Canola cytosol 61.36 61.64
CDY26861 Canola cytosol 61.36 61.64
KRH02498 Soybean cytosol 60.0 60.55
Bra003645.1-P Field mustard cytosol 55.91 60.29
Bra026684.1-P Field mustard cytosol 59.55 59.82
Bra026681.1-P Field mustard cytosol 59.55 59.82
CDY21758 Canola cytosol 59.55 59.82
CDY48475 Canola cytosol 45.91 59.76
KRH13622 Soybean cytosol 46.36 59.65
CDX68018 Canola cytosol 59.09 59.63
Bra025995.1-P Field mustard cytosol 58.18 59.53
CDY26267 Canola cytosol 58.18 59.53
CDX68017 Canola cytosol 58.64 59.45
CDX81808 Canola cytosol 59.09 59.36
VIT_19s0093g00350.t01 Wine grape cytosol 59.55 59.28
VIT_19s0093g00400.t01 Wine grape cytosol 59.55 59.28
AT1G17180.1 Thale cress cytosol 59.55 59.28
AT1G78340.1 Thale cress cytosol 58.64 59.17
Bra003646.1-P Field mustard cytosol 58.64 59.17
CDX79260 Canola cytosol 58.18 58.99
Bra035029.1-P Field mustard cytosol 58.18 58.72
Bra025994.1-P Field mustard cytosol 58.18 58.45
CDX79259 Canola cytosol 58.18 58.45
CDY26266 Canola cytosol 58.18 58.45
PGSC0003DMT400020286 Potato cytosol 54.09 58.33
CDX88438 Canola cytosol 57.73 58.26
CDX88439 Canola cytosol 57.73 58.26
AT1G78360.1 Thale cress endoplasmic reticulum 58.18 58.18
CDX87452 Canola cytosol 58.18 58.18
Bra035031.1-P Field mustard cytosol 58.18 58.18
CDY48476 Canola cytosol 57.27 57.53
Bra026680.1-P Field mustard cytosol 57.27 57.53
KRH13620 Soybean cytosol 57.73 57.47
CDX81807 Canola cytosol 56.82 57.34
KRH43845 Soybean cytosol 57.73 57.21
AT1G78370.1 Thale cress cytosol 56.36 57.14
CDX81810 Canola cytosol 56.82 57.08
CDY21757 Canola cytosol 56.36 56.62
CDX81809 Canola cytosol 56.36 56.62
CDX88440 Canola cytosol 56.36 56.36
Bra026679.1-P Field mustard cytosol 55.91 56.16
AT1G17190.1 Thale cress cytosol 55.91 55.91
CDX83922 Canola cytosol 55.45 55.71
CDX96787 Canola cytosol 55.45 55.71
CDY21756 Canola cytosol 55.45 55.71
Bra016615.1-P Field mustard cytosol 55.45 55.71
VIT_19s0093g00320.t01 Wine grape cytosol 55.91 55.66
CDX88441 Canola cytosol 55.0 54.75
Bra025993.1-P Field mustard cytosol 54.55 54.55
PGSC0003DMT400092412 Potato cytosol 54.09 54.34
PGSC0003DMT400001779 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 42.73 54.34
CDY48477 Canola cytosol 46.82 53.93
KRH43846 Soybean cytosol 49.09 52.94
PGSC0003DMT400058268 Potato cytosol 25.91 52.29
PGSC0003DMT400094585 Potato cytosol 52.27 52.04
AT3G43800.1 Thale cress cytosol 53.18 51.54
CDX87952 Canola cytosol 52.27 50.66
Bra034977.1-P Field mustard cytosol 51.82 50.22
CDY12324 Canola cytosol 51.82 50.22
PGSC0003DMT400020098 Potato cytosol 52.73 45.67
Bra003648.1-P Field mustard cytosol 30.45 44.97
PGSC0003DMT400019934 Potato cytosol 37.73 37.9
PGSC0003DMT400058271 Potato cytosol 39.09 37.23
PGSC0003DMT400040670 Potato cytosol 38.64 36.8
CDX68020 Canola cytosol 5.91 36.11
PGSC0003DMT400095775 Potato cytosol 29.55 33.68
PGSC0003DMT400091065 Potato cytosol 36.36 24.69
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987UniProt:M1CN57
PFAM:PF02798PFAM:PF13410EnsemblPlantsGene:PGSC0003DMG400027637PGSC:PGSC0003DMG400027637EnsemblPlants:PGSC0003DMT400071059PFscan:PS50404
PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF479SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sf
UniParc:UPI0002955664:::::
Description
Glutathione S-transferase T5 [Source:PGSC_GENE;Acc:PGSC0003DMG400027637]
Coordinates
chr7:-:51714410..51716222
Molecular Weight (calculated)
25582.2 Da
IEP (calculated)
6.675
GRAVY (calculated)
-0.220
Length
220 amino acids
Sequence
(BLAST)
001: MSDEVVLLDT FVSVFGMRVR IALAEKGIQY EYKEEDLMNK SHLLLQMNPI HKKIPVLIHN GKPICESLII VEYIDEVWKD KSPPLMPSDP YKRAHARFWA
101: DYIGKKIYDG GMKIWSSKVE EHKTANKEFI ECLKVLEGEL GDKPYFEGEN FGLVDMAFIP YYSWFPVYKK LSNLNIEAEC PKFVAWAQRC MQKESVSKSL
201: VDPDKVYEFI VLFRQKIGVA
Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)
001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
Arabidopsis Description
GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.