Factsheet for PGSC0003DMT400079842

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 4
extracellular 3
endoplasmic reticulum 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037986	Potato	cytosol	92.34	98.56
Solyc07g056440.2.1	Tomato	cytosol	95.95	95.95
PGSC0003DMT400037996	Potato	cytosol	86.94	87.73
PGSC0003DMT400079841	Potato	cytosol	86.04	86.82
PGSC0003DMT400037990	Potato	cytosol	84.68	85.45
PGSC0003DMT400079840	Potato	cytosol	78.83	84.95
PGSC0003DMT400037994	Potato	cytosol	81.08	81.82
PGSC0003DMT400079839	Potato	cytosol	80.63	81.36
PGSC0003DMT400054729	Potato	cytosol	68.47	68.78
PGSC0003DMT400038054	Potato	endoplasmic reticulum	67.12	68.04
PGSC0003DMT400071059	Potato	cytosol	66.67	67.27
PGSC0003DMT400071057	Potato	cytosol	66.22	67.12
PGSC0003DMT400020286	Potato	cytosol	60.36	65.69
PGSC0003DMT400001779	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.85	60.12
PGSC0003DMT400092412	Potato	cytosol	58.56	59.36
PGSC0003DMT400094585	Potato	cytosol	54.05	54.3
PGSC0003DMT400058268	Potato	cytosol	26.13	53.21
PGSC0003DMT400020098	Potato	cytosol	53.6	46.85
PGSC0003DMT400019934	Potato	cytosol	38.29	38.81
PGSC0003DMT400058271	Potato	cytosol	40.09	38.53
PGSC0003DMT400040670	Potato	cytosol	39.64	38.1
PGSC0003DMT400095775	Potato	cytosol	30.18	34.72
PGSC0003DMT400091065	Potato	cytosol	36.49	25.0

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:102580173	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
UniProt:M1D2J4	PFAM:PF02798	PFAM:PF13410	EnsemblPlantsGene:PGSC0003DMG400031094	PGSC:PGSC0003DMG400031094	EnsemblPlants:PGSC0003DMT400079842
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000294D7D5	RefSeq:XP_006366779.1	SEG:seg	:	:

Description

Glutathione S-transferase/peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400031094]

Coordinates

chr7:+:51637719..51639565

Molecular Weight (calculated)

25825.1 Da

IEP (calculated)

5.076

GRAVY (calculated)

-0.318

Length

222 amino acids

Sequence
(BLAST)

001: MANDEVILLD FWASMFGMRL RIALAEKEIK YEYKEEEGLI TNKSSLLLEM NPIHKKVPVL IHNGKPICES IIGVEYIEEV WKDKAPLLPS DPYERAQARF
101: WADYIDKKLY VSSRKIWGTK GEEQEAGKKD FIEVLKVLEG ELGEKPYFGG DNFGFVDIAL IGFYSWFYAY ETYGNFSTEA ECPKFVAWAK RCMQRDSVAK
201: SLPDQHKVFE FIQMLRQKFG IE

Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)

001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE

Arabidopsis Description

GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.