Factsheet for PGSC0003DMT400001779

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 4
vacuole 4
extracellular 3
endoplasmic reticulum 3
plasma membrane 3
golgi 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071057	Potato	cytosol	65.9	52.05
KRH30655	Soybean	cytosol	61.85	48.42
PGSC0003DMT400037996	Potato	cytosol	61.27	48.18
PGSC0003DMT400054729	Potato	cytosol	60.69	47.51
PGSC0003DMT400079842	Potato	cytosol	60.12	46.85
PGSC0003DMT400037990	Potato	cytosol	58.96	46.36
PGSC0003DMT400037986	Potato	cytosol	54.91	45.67
PGSC0003DMT400079839	Potato	cytosol	57.8	45.45
PGSC0003DMT400079841	Potato	cytosol	57.8	45.45
PGSC0003DMT400038054	Potato	endoplasmic reticulum	55.49	43.84
PGSC0003DMT400079840	Potato	cytosol	51.45	43.2
PGSC0003DMT400037994	Potato	cytosol	54.91	43.18
PGSC0003DMT400071059	Potato	cytosol	54.34	42.73
PGSC0003DMT400020286	Potato	cytosol	49.71	42.16
PGSC0003DMT400094585	Potato	cytosol	49.13	38.46
PGSC0003DMT400092412	Potato	cytosol	43.93	34.7
PGSC0003DMT400020098	Potato	cytosol	50.29	34.25
PGSC0003DMT400058268	Potato	cytosol	16.18	25.69
PGSC0003DMT400019934	Potato	cytosol	32.37	25.57
PGSC0003DMT400058271	Potato	cytosol	32.95	24.68
PGSC0003DMT400040670	Potato	cytosol	30.64	22.94
PGSC0003DMT400095775	Potato	cytosol	23.12	20.73
PGSC0003DMT400091065	Potato	cytosol	30.64	16.36

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M0ZJ25	PFAM:PF13410
PFAM:PF13417	EnsemblPlantsGene:PGSC0003DMG400000667	PGSC:PGSC0003DMG400000667	EnsemblPlants:PGSC0003DMT400001779	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002948701

Description

Glutathione S-transferase MSR-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400000667]

Coordinates

chr7:-:45084371..45085633

Molecular Weight (calculated)

19607.5 Da

IEP (calculated)

5.337

GRAVY (calculated)

-0.174

Length

173 amino acids

Sequence
(BLAST)

001: MEGTNNVVLL DFWASSFGMR LRIALALKGI QYEGREENLF DKSPLLLKMN SVHKKIPVIY STGRRVWSGK GEDQEEAKKD LIEIFKTLEG ELGDKTYFGG
101: DENLGFVDVA LVPFSSWFYS NETCANFSIE AECSILVAWA KRCMEIESVS NSLPHPHKIY AYVLELKNKF GLP

Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)

001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE

Arabidopsis Description

GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.