Factsheet for PGSC0003DMT400037994

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 3
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g056460.2.1	Tomato	plastid	93.18	93.18
Solyc07g056470.2.1	Tomato	plastid	88.64	88.64
PGSC0003DMT400037996	Potato	cytosol	84.55	84.55
PGSC0003DMT400037986	Potato	cytosol	76.82	81.25
PGSC0003DMT400079842	Potato	cytosol	81.82	81.08
PGSC0003DMT400037990	Potato	cytosol	80.91	80.91
PGSC0003DMT400079841	Potato	cytosol	80.91	80.91
PGSC0003DMT400079839	Potato	cytosol	78.64	78.64
PGSC0003DMT400079840	Potato	cytosol	73.18	78.16
PGSC0003DMT400038054	Potato	endoplasmic reticulum	65.91	66.21
PGSC0003DMT400054729	Potato	cytosol	66.36	66.06
PGSC0003DMT400020286	Potato	cytosol	59.55	64.22
PGSC0003DMT400071059	Potato	cytosol	64.09	64.09
PGSC0003DMT400071057	Potato	cytosol	61.36	61.64
PGSC0003DMT400092412	Potato	cytosol	57.27	57.53
PGSC0003DMT400001779	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.18	54.91
PGSC0003DMT400094585	Potato	cytosol	52.73	52.49
PGSC0003DMT400058268	Potato	cytosol	25.91	52.29
PGSC0003DMT400020098	Potato	cytosol	52.27	45.28
PGSC0003DMT400019934	Potato	cytosol	40.0	40.18
PGSC0003DMT400058271	Potato	cytosol	41.36	39.39
PGSC0003DMT400040670	Potato	cytosol	40.0	38.1
PGSC0003DMT400095775	Potato	cytosol	30.91	35.23
PGSC0003DMT400091065	Potato	cytosol	39.09	26.54

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M1B670
PFAM:PF02798	PFAM:PF13410	EnsemblPlantsGene:PGSC0003DMG400014656	PGSC:PGSC0003DMG400014656	EnsemblPlants:PGSC0003DMT400037994	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI000296D4A6	:	:	:	:	:

Description

Glutathione S-transferase/peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400014656]

Coordinates

chr1:+:88263157..88264835

Molecular Weight (calculated)

25817.0 Da

IEP (calculated)

5.828

GRAVY (calculated)

-0.385

Length

220 amino acids

Sequence
(BLAST)

001: MANDEVIVLG FWPSMFGLRV RIALAEKEVK YEYREEDLKN KSPLLLQMNP IHTKIPVLIH NGKPICESII GVEYIDEVWK DKAPLLPSDP YERAQARFWA
101: DYINKKFYWP ARKLWTTKGE EQETAKKDFI ECLKVLEGEL GEKPYFGGDN FGFVDITLIG FYCWFSAYET YGYFSTEAEF PKFFAWAKRC MQRDSVAQSL
201: PDQHKVLEYV KPVRQRLGIE

Best Arabidopsis Sequence Match ( AT1G78380.1 )
(BLAST)

001: MANEVILLDF WPSMFGMRTR IALREKGVEF EYREEDLRNK SPLLLQMNPI HKKIPVLIHN GKPVNESIIQ VQYIDEVWSH KNPILPSDPY LRAQARFWAD
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE

Arabidopsis Description

GSTU19GSTU19 [Source:UniProtKB/TrEMBL;Acc:A0A178W4K6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.