Factsheet for PGSC0003DMT400019934

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058268	Potato	cytosol	31.51	63.3
PGSC0003DMT400095775	Potato	cytosol	48.86	55.44
PGSC0003DMT400040670	Potato	cytosol	54.79	51.95
CDY45140	Canola	cytosol	29.68	51.18
PGSC0003DMT400058271	Potato	cytosol	53.42	50.65
CDY45138	Canola	cytosol	47.49	46.85
Os10t0525800-00	Rice	cytosol	46.58	46.79
AT1G59700.1	Thale cress	cytosol	49.77	46.58
Os10t0481300-01	Rice	cytosol	43.38	46.57
CDX77247	Canola	cytosol	47.49	46.43
GSMUA_Achr1P03800_001	Banana	cytosol	47.95	46.26
Bra027840.1-P	Field mustard	cytosol	49.32	46.15
AT1G59670.1	Thale cress	cytosol	47.95	45.06
CDY30898	Canola	cytosol	47.95	44.87
CDY30896	Canola	cytosol	47.03	44.59
Os10t0525500-01	Rice	cytosol, plastid	29.22	44.44
GSMUA_Achr5P10340_001	Banana	cytosol	46.58	43.97
GSMUA_Achr5P10360_001	Banana	cytosol	46.58	42.68
GSMUA_Achr5P10350_001	Banana	cytosol	45.66	42.37
TraesCS1B01G194900.1	Wheat	cytosol	45.66	42.19
PGSC0003DMT400037996	Potato	cytosol	42.01	41.82
TraesCS5B01G192400.1	Wheat	cytosol	43.84	41.56
TraesCS5D01G200100.1	Wheat	cytosol	43.84	41.56
Os10t0525400-01	Rice	cytosol, plastid	46.12	41.39
PGSC0003DMT400079841	Potato	cytosol	41.1	40.91
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.01	40.89
EER92035	Sorghum	cytosol	44.75	40.66
TraesCS1D01G189600.1	Wheat	cytosol	43.84	40.51
Bra027842.1-P	Field mustard	cytosol	28.31	40.26
TraesCS5A01G190900.1	Wheat	cytosol	42.47	40.26
PGSC0003DMT400038054	Potato	endoplasmic reticulum	40.18	40.18
PGSC0003DMT400071057	Potato	cytosol	40.18	40.18
EER92034	Sorghum	endoplasmic reticulum	42.47	40.09
PGSC0003DMT400037994	Potato	cytosol	40.18	40.0
EER92036	Sorghum	cytosol	42.92	40.0
PGSC0003DMT400079839	Potato	cytosol	40.18	40.0
HORVU1Hr1G049090.2	Barley	cytosol	43.38	39.92
PGSC0003DMT400037986	Potato	cytosol	37.9	39.9
PGSC0003DMT400091065	Potato	cytosol	58.9	39.81
PGSC0003DMT400079840	Potato	cytosol	37.44	39.81
TraesCS1A01G187000.1	Wheat	cytosol	42.92	39.66
EES00905	Sorghum	cytosol	42.47	39.24
PGSC0003DMT400037990	Potato	cytosol	38.81	38.64
PGSC0003DMT400079842	Potato	cytosol	38.81	38.29
HORVU5Hr1G058000.8	Barley	cytosol	40.18	37.93
PGSC0003DMT400092412	Potato	cytosol	37.9	37.9
PGSC0003DMT400020286	Potato	cytosol	35.16	37.75
PGSC0003DMT400071059	Potato	cytosol	37.9	37.73
PGSC0003DMT400054729	Potato	cytosol	37.44	37.1
HORVU1Hr1G049070.1	Barley	cytosol	43.38	36.68
Zm00001d027557_P001	Maize	cytosol	40.64	35.04
PGSC0003DMT400094585	Potato	cytosol	33.33	33.03
PGSC0003DMT400001779	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.57	32.37
PGSC0003DMT400020098	Potato	cytosol	32.88	28.35
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	36.07	27.34

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:102599465	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	UniProt:M1ACT3	PFAM:PF00043	PFAM:PF13417	EnsemblPlantsGene:PGSC0003DMG400007714	PGSC:PGSC0003DMG400007714
EnsemblPlants:PGSC0003DMT400019934	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF487	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002956A1D	RefSeq:XP_006365140.1	:	:

Description

Glutathione S-transferase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400007714]

Coordinates

chr1:-:43357106..43360031

Molecular Weight (calculated)

24825.3 Da

IEP (calculated)

4.495

GRAVY (calculated)

0.111

Length

219 amino acids

Sequence
(BLAST)

001: MEAITNIKVL GTSTSPFSNR VEIALNIKSL DYEFIVEDNF NNKSELLLQS NPIHKKIPIL IHGDKAMCES LVILQYIDET WPDGLSILPS DPYDCAIARF
101: WATYVDNKWF PLMLEIREAM GKDAKKVVLQ NIIEGLDQLE EAFVKCSKGK DFFGGDNIGY VDIVLGCFLG WIRGMEMMLG LNLVYEAQTP SLAKWAERFL
201: SEKVVKDVIL EHGVLDFLL

Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)

001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA

Arabidopsis Description

GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.