Factsheet for PGSC0003DMT400095775

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g026210.1.1	Tomato	nucleus	90.67	76.09
PGSC0003DMT400091065	Potato	cytosol	100.0	59.57
PGSC0003DMT400058268	Potato	cytosol	28.5	50.46
PGSC0003DMT400019934	Potato	cytosol	55.44	48.86
PGSC0003DMT400058271	Potato	cytosol	56.99	47.62
PGSC0003DMT400040670	Potato	cytosol	54.92	45.89
Os10t0481300-01	Rice	cytosol	46.63	44.12
GSMUA_Achr5P10340_001	Banana	cytosol	52.85	43.97
GSMUA_Achr5P10360_001	Banana	cytosol	52.33	42.26
Os10t0525800-00	Rice	cytosol	46.63	41.28
CDY45138	Canola	cytosol	47.15	40.99
CDY45140	Canola	cytosol	26.94	40.94
CDX77247	Canola	cytosol	47.15	40.62
Bra027840.1-P	Field mustard	cytosol	49.22	40.6
GSMUA_Achr1P03800_001	Banana	cytosol	47.15	40.09
GSMUA_Achr5P10350_001	Banana	cytosol	48.7	39.83
CDY30896	Canola	cytosol	47.67	39.83
CDY30898	Canola	cytosol	48.19	39.74
AT1G59700.1	Thale cress	cytosol	47.15	38.89
AT1G59670.1	Thale cress	cytosol	46.63	38.63
EER92034	Sorghum	endoplasmic reticulum	45.08	37.5
EER92036	Sorghum	cytosol	45.6	37.45
TraesCS1B01G194900.1	Wheat	cytosol	45.6	37.13
Os10t0525400-01	Rice	cytosol, plastid	46.63	36.89
TraesCS1D01G189600.1	Wheat	cytosol	45.08	36.71
HORVU1Hr1G049090.2	Barley	cytosol	45.08	36.55
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.97	36.0
TraesCS1A01G187000.1	Wheat	cytosol	44.04	35.87
EER92035	Sorghum	cytosol	44.56	35.68
EES00905	Sorghum	cytosol	43.52	35.44
Os10t0525500-01	Rice	cytosol, plastid	26.42	35.42
TraesCS5D01G200100.1	Wheat	cytosol	41.97	35.06
TraesCS5B01G192400.1	Wheat	cytosol	41.45	34.63
TraesCS5A01G190900.1	Wheat	cytosol	41.45	34.63
PGSC0003DMT400079840	Potato	cytosol	36.27	33.98
HORVU1Hr1G049070.1	Barley	cytosol	45.08	33.59
PGSC0003DMT400020286	Potato	cytosol	34.72	32.84
Zm00001d027557_P001	Maize	cytosol	43.01	32.68
PGSC0003DMT400079839	Potato	cytosol	36.79	32.27
PGSC0003DMT400079841	Potato	cytosol	36.79	32.27
PGSC0003DMT400037986	Potato	cytosol	34.72	32.21
PGSC0003DMT400071057	Potato	cytosol	36.27	31.96
HORVU5Hr1G058000.8	Barley	cytosol	38.34	31.9
PGSC0003DMT400037996	Potato	cytosol	35.23	30.91
PGSC0003DMT400037994	Potato	cytosol	35.23	30.91
PGSC0003DMT400037990	Potato	cytosol	35.23	30.91
PGSC0003DMT400079842	Potato	cytosol	34.72	30.18
PGSC0003DMT400054729	Potato	cytosol	34.2	29.86
PGSC0003DMT400038054	Potato	endoplasmic reticulum	33.68	29.68
PGSC0003DMT400071059	Potato	cytosol	33.68	29.55
PGSC0003DMT400092412	Potato	cytosol	33.16	29.22
PGSC0003DMT400020098	Potato	cytosol	36.27	27.56
Bra027842.1-P	Field mustard	cytosol	21.76	27.27
PGSC0003DMT400094585	Potato	cytosol	31.09	27.15
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	35.75	23.88
PGSC0003DMT400001779	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.73	23.12

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
UniProt:M1DX16	PFAM:PF00043	PFAM:PF02798	EnsemblPlantsGene:PGSC0003DMG400045346	PGSC:PGSC0003DMG400045346	EnsemblPlants:PGSC0003DMT400095775
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF487	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000296821C	:	:	:	:

Description

Glutathione S-transferase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400045346]

Coordinates

chr5:-:6385112..6386179

Molecular Weight (calculated)

21618.5 Da

IEP (calculated)

5.768

GRAVY (calculated)

-0.032

Length

193 amino acids

Sequence
(BLAST)

001: MSNKSELLLK SNPVHKKIPV LIHGDNTICE SLVIVQYIDE TWTNGPSILP SNPLDRAIAR FWVAYIDDKW LPLMSDLGKA QGEEAKLEVQ EKLQEALVPL
101: EEAFVKCSKG KSFFGGDNIG YIDITLGCIL GWIKAIKIML GIEIFNVTKT PGLVNWGDRF LEDKFVKGAM LEPEKLVEIL KLHLAKREAN NAN

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.