Factsheet for Solyc05g026210.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
vacuole 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400095775	Potato	cytosol	76.09	90.67
PGSC0003DMT400091065	Potato	cytosol	90.0	63.89
Solyc05g006740.2.1	Tomato	cytosol	51.3	55.14
Solyc05g026220.1.1	Tomato	cytosol	38.26	55.0
Solyc05g006750.2.1	Tomato	cytosol	53.48	53.71
CDY45140	Canola	cytosol	28.26	51.18
GSMUA_Achr5P10340_001	Banana	cytosol	51.3	50.86
Solyc05g006730.2.1	Tomato	mitochondrion	48.7	49.78
GSMUA_Achr5P10360_001	Banana	cytosol	50.0	48.12
GSMUA_Achr1P03800_001	Banana	cytosol	46.52	47.14
CDY45138	Canola	cytosol	44.35	45.95
Os10t0525800-00	Rice	cytosol	43.48	45.87
GSMUA_Achr5P10350_001	Banana	cytosol	46.96	45.76
Bra027840.1-P	Field mustard	cytosol	46.52	45.73
Os10t0481300-01	Rice	cytosol	40.43	45.59
CDX77247	Canola	cytosol	44.35	45.54
CDY30898	Canola	cytosol	46.09	45.3
CDY30896	Canola	cytosol	44.78	44.59
AT1G59670.1	Thale cress	cytosol	44.78	44.21
Os10t0525500-01	Rice	cytosol, plastid	27.39	43.75
EER92036	Sorghum	cytosol	43.91	42.98
AT1G59700.1	Thale cress	cytosol	43.48	42.73
EER92034	Sorghum	endoplasmic reticulum	43.04	42.67
TraesCS1B01G194900.1	Wheat	cytosol	43.91	42.62
Solyc07g056450.2.1	Tomato	cytosol	25.65	42.45
HORVU1Hr1G049090.2	Barley	cytosol	43.04	41.6
Os10t0525400-01	Rice	cytosol, plastid	43.91	41.39
TraesCS1D01G189600.1	Wheat	cytosol	42.61	41.35
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.43	41.33
TraesCS5D01G200100.1	Wheat	cytosol	41.3	41.13
TraesCS1A01G187000.1	Wheat	cytosol	42.17	40.93
TraesCS5B01G192400.1	Wheat	cytosol	40.87	40.69
TraesCS5A01G190900.1	Wheat	cytosol	40.87	40.69
EER92035	Sorghum	cytosol	42.17	40.25
EES00905	Sorghum	cytosol	41.3	40.08
Solyc07g056510.2.1	Tomato	cytosol	36.52	38.36
HORVU1Hr1G049070.1	Barley	cytosol	43.04	38.22
Solyc07g056470.2.1	Tomato	plastid	36.52	38.18
HORVU5Hr1G058000.8	Barley	cytosol	38.26	37.93
Solyc07g056430.2.1	Tomato	cytosol	23.04	37.86
Zm00001d027557_P001	Maize	cytosol	41.74	37.8
Bra027842.1-P	Field mustard	cytosol	25.22	37.66
Solyc12g011310.1.1	Tomato	plastid	35.65	37.44
Solyc07g056490.2.1	Tomato	extracellular	35.65	37.44
Solyc07g056420.2.1	Tomato	extracellular	34.78	36.36
Solyc12g011320.1.1	Tomato	cytosol	34.35	36.07
Solyc07g056480.2.1	Tomato	cytosol, plastid	34.35	35.91
Solyc07g056460.2.1	Tomato	plastid	34.35	35.91
Solyc10g007640.2.1	Tomato	cytosol	34.35	35.75
Solyc07g056440.2.1	Tomato	cytosol	34.35	35.59
Solyc12g011300.1.1	Tomato	cytosol	33.91	35.45
Solyc02g081240.1.1	Tomato	cytosol	33.91	35.14
Solyc10g007620.1.1	Tomato	cytosol	31.74	33.33
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	33.48	26.64

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987
GO:GO:0016740	GO:GO:0019748	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:K4C008	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF487	SUPFAM:SSF47616	SUPFAM:SSF52833	EnsemblPlantsGene:Solyc05g026210.1
EnsemblPlants:Solyc05g026210.1.1	InterPro:Thioredoxin-like_sf	UniParc:UPI0002765EE2	:	:	:

Description

No Description!

Coordinates

chr5:-:40113650..40114827

Molecular Weight (calculated)

25696.6 Da

IEP (calculated)

5.160

GRAVY (calculated)

0.140

Length

230 amino acids

Sequence
(BLAST)

001: MATSIIKVLG TPASPFANRV SIALNVKSVD YEFVQEDMSN KSELLLKSNP VYKKIPVLIL GENIICESLV IVQYIDETWT NGPSVLPSNP LDRAITRFWV
101: AYIDCKWLPL MSDLGKAQGE EAILEVQEKL QQALVPLEEA FVKCSKGKSF FGGENIGYID IALWCILGWI KAIKIMLGIE IFNVTKAPEL VNWGNRFLED
201: KCVKGAMLEP EKLVEIVKLH LAKKEANNAN

Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)

001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA

Arabidopsis Description

GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.