Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400037990 | Potato | cytosol | 89.21 | 56.36 |
| Solyc07g056470.2.1 | Tomato | plastid | 85.61 | 54.09 |
| Solyc07g056420.2.1 | Tomato | extracellular | 84.17 | 53.18 |
| Solyc07g056440.2.1 | Tomato | cytosol | 84.89 | 53.15 |
| Solyc07g056460.2.1 | Tomato | plastid | 82.73 | 52.27 |
| Solyc07g056480.2.1 | Tomato | cytosol, plastid | 82.01 | 51.82 |
| Solyc07g056430.2.1 | Tomato | cytosol | 48.2 | 47.86 |
| Solyc10g007640.2.1 | Tomato | cytosol | 69.06 | 43.44 |
| Solyc07g056510.2.1 | Tomato | cytosol | 67.63 | 42.92 |
| Solyc12g011310.1.1 | Tomato | plastid | 66.91 | 42.47 |
| Solyc07g056490.2.1 | Tomato | extracellular | 66.91 | 42.47 |
| Solyc10g007620.1.1 | Tomato | cytosol | 64.03 | 40.64 |
| Solyc12g011300.1.1 | Tomato | cytosol | 63.31 | 40.0 |
| Solyc12g011320.1.1 | Tomato | cytosol | 56.12 | 35.62 |
| Solyc02g081240.1.1 | Tomato | cytosol | 51.8 | 32.43 |
| Solyc05g006730.2.1 | Tomato | mitochondrion | 48.2 | 29.78 |
| Solyc05g006740.2.1 | Tomato | cytosol | 43.17 | 28.04 |
| Solyc05g026220.1.1 | Tomato | cytosol | 30.94 | 26.88 |
| Solyc05g006750.2.1 | Tomato | cytosol | 43.88 | 26.64 |
| Solyc05g026210.1.1 | Tomato | nucleus | 42.45 | 25.65 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004364 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006749 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009407 | GO:GO:0009987 |
| GO:GO:0016740 | GO:GO:0019748 | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 |
| UniProt:K4CGH8 | PFAM:PF02798 | PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR11260 | PANTHER:PTHR11260:SF479 |
| SUPFAM:SSF52833 | EnsemblPlantsGene:Solyc07g056450.2 | EnsemblPlants:Solyc07g056450.2.1 | InterPro:Thioredoxin-like_sf | UniParc:UPI000276B25A | SEG:seg |
Description
No Description!
Coordinates
chr7:+:64291231..64292940
Molecular Weight (calculated)
16357.9 Da
IEP (calculated)
5.044
GRAVY (calculated)
-0.294
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MANDEVILLD FWPSMFGMRL RIALAEKEVK YEYKEEDVWN KSPLLLEMNP IYKKVPVLIH NGKPICESII GVEYIEEVWK DKAPLLPFDP YERAQARFWA
101: DYINKKCETY GNFSLEAECP KLVAWAKRCM QRDCGQVFA
101: DYINKKCETY GNFSLEAECP KLVAWAKRCM QRDCGQVFA
001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
Arabidopsis Description
GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.