Factsheet for Solyc07g056440.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 4
extracellular 3
endoplasmic reticulum 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079842	Potato	cytosol	95.95	95.95
PGSC0003DMT400037986	Potato	cytosol	89.64	95.67
Solyc07g056430.2.1	Tomato	cytosol	57.66	91.43
Solyc07g056450.2.1	Tomato	cytosol	53.15	84.89
Solyc07g056480.2.1	Tomato	cytosol, plastid	83.33	84.09
Solyc07g056460.2.1	Tomato	plastid	80.63	81.36
Solyc07g056470.2.1	Tomato	plastid	80.18	80.91
Solyc07g056420.2.1	Tomato	extracellular	79.73	80.45
Solyc07g056490.2.1	Tomato	extracellular	67.57	68.49
Solyc07g056510.2.1	Tomato	cytosol	67.12	68.04
Solyc10g007640.2.1	Tomato	cytosol	67.12	67.42
Solyc12g011310.1.1	Tomato	plastid	65.77	66.67
Solyc12g011300.1.1	Tomato	cytosol	64.41	65.0
Solyc10g007620.1.1	Tomato	cytosol	56.31	57.08
Solyc12g011320.1.1	Tomato	cytosol	54.05	54.79
Solyc02g081240.1.1	Tomato	cytosol	54.5	54.5
Solyc05g026220.1.1	Tomato	cytosol	27.93	38.75
Solyc05g006730.2.1	Tomato	mitochondrion	39.19	38.67
Solyc05g006740.2.1	Tomato	cytosol	36.49	37.85
Solyc05g006750.2.1	Tomato	cytosol	37.39	36.24
Solyc05g026210.1.1	Tomato	nucleus	35.59	34.35

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987
GO:GO:0016740	GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	UniProt:K4CGH7	PFAM:PF02798	PFAM:PF13410	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833	EnsemblPlantsGene:Solyc07g056440.2	EnsemblPlants:Solyc07g056440.2.1
InterPro:Thioredoxin-like_sf	UniParc:UPI000276B074	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:+:64287551..64289361

Molecular Weight (calculated)

25713.1 Da

IEP (calculated)

5.477

GRAVY (calculated)

-0.261

Length

222 amino acids

Sequence
(BLAST)

001: MANDELILLD FWASMFGMRL RIALAEKGIK YEYKEEEGLI SNKSALLLEM NPIHKKVPVL IHNGKPICES IIGVEYIEEV WKDKAPLLPS DPYERAQARF
101: WVDYIDKKLY VSARKIWGTK GEEQEAGKKD FIEVLKVLEG ELGEKPYFGG DNFGFVDIAL IGFYSWFYAY ETYGNFSAEA ECPKFVAWAK RCMQRDSVAK
201: SLPDQHKVLE FIQMLRRKFG IE

Best Arabidopsis Sequence Match ( AT1G78380.1 )
(BLAST)

001: MANEVILLDF WPSMFGMRTR IALREKGVEF EYREEDLRNK SPLLLQMNPI HKKIPVLIHN GKPVNESIIQ VQYIDEVWSH KNPILPSDPY LRAQARFWAD
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE

Arabidopsis Description

GSTU19GSTU19 [Source:UniProtKB/TrEMBL;Acc:A0A178W4K6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.