Factsheet for Solyc07g056470.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 5
vacuole 3
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g056460.2.1	Tomato	plastid	91.36	91.36
PGSC0003DMT400037994	Potato	cytosol	88.64	88.64
Solyc07g056450.2.1	Tomato	cytosol	54.09	85.61
Solyc07g056480.2.1	Tomato	cytosol, plastid	85.0	85.0
Solyc07g056430.2.1	Tomato	cytosol	53.64	84.29
Solyc07g056420.2.1	Tomato	extracellular	80.91	80.91
Solyc07g056440.2.1	Tomato	cytosol	80.91	80.18
Solyc07g056490.2.1	Tomato	extracellular	68.64	68.95
Solyc10g007640.2.1	Tomato	cytosol	67.27	66.97
Solyc12g011310.1.1	Tomato	plastid	65.45	65.75
Solyc07g056510.2.1	Tomato	cytosol	64.55	64.84
Solyc12g011300.1.1	Tomato	cytosol	64.09	64.09
Solyc10g007620.1.1	Tomato	cytosol	58.64	58.9
Solyc12g011320.1.1	Tomato	cytosol	53.18	53.42
Solyc02g081240.1.1	Tomato	cytosol	51.82	51.35
Solyc05g006730.2.1	Tomato	mitochondrion	42.27	41.33
Solyc05g006740.2.1	Tomato	cytosol	39.55	40.65
Solyc05g026220.1.1	Tomato	cytosol	28.18	38.75
Solyc05g006750.2.1	Tomato	cytosol	39.55	37.99
Solyc05g026210.1.1	Tomato	nucleus	38.18	36.52

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987
GO:GO:0016740	GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	UniProt:K4CGI0	PFAM:PF02798	PFAM:PF13410	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833	EnsemblPlantsGene:Solyc07g056470.2	EnsemblPlants:Solyc07g056470.2.1
InterPro:Thioredoxin-like_sf	UniParc:UPI000276B25C	:	:	:	:

Description

No Description!

Coordinates

chr7:+:64296528..64299942

Molecular Weight (calculated)

25515.7 Da

IEP (calculated)

5.822

GRAVY (calculated)

-0.285

Length

220 amino acids

Sequence
(BLAST)

001: MANNEVILLD FWPSMFGLRL RIALAEKEVK YEYREEDLPN KSPLLLQMNP IHKKIPVLIH NGKPICESII GVEYIDEVWK DKAPLLPSDP YERAQARFWA
101: DYIDKKFYWA SRKLWTTKGE ELDAAKEEFI VCLKVLEGAL GDKPYFGGDN FGFVDIALIG FYCWFSAYET YGNFSTEAES PKFVAWAKRC MQRDSVAKSS
201: PDQHKVLEFV KVVRQRLGIE

Best Arabidopsis Sequence Match ( AT1G78380.1 )
(BLAST)

001: MANEVILLDF WPSMFGMRTR IALREKGVEF EYREEDLRNK SPLLLQMNPI HKKIPVLIHN GKPVNESIIQ VQYIDEVWSH KNPILPSDPY LRAQARFWAD
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE

Arabidopsis Description

GSTU19GSTU19 [Source:UniProtKB/TrEMBL;Acc:A0A178W4K6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.