Factsheet for Solyc07g056510.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071057	Potato	cytosol	93.15	93.15
Solyc07g056430.2.1	Tomato	cytosol	44.75	70.0
Solyc07g056450.2.1	Tomato	cytosol	42.92	67.63
Solyc07g056440.2.1	Tomato	cytosol	68.04	67.12
Solyc12g011310.1.1	Tomato	plastid	66.67	66.67
Solyc07g056490.2.1	Tomato	extracellular	66.21	66.21
Solyc07g056480.2.1	Tomato	cytosol, plastid	65.3	65.0
Solyc07g056470.2.1	Tomato	plastid	64.84	64.55
Solyc07g056420.2.1	Tomato	extracellular	63.01	62.73
Solyc10g007640.2.1	Tomato	cytosol	63.01	62.44
Solyc07g056460.2.1	Tomato	plastid	62.1	61.82
Solyc12g011300.1.1	Tomato	cytosol	61.19	60.91
Bra008357.1-P	Field mustard	cytosol	30.14	57.89
Solyc12g011320.1.1	Tomato	cytosol	55.25	55.25
Solyc10g007620.1.1	Tomato	cytosol	55.25	55.25
VIT_19s0093g00290.t01	Wine grape	mitochondrion	31.96	54.69
Solyc02g081240.1.1	Tomato	cytosol	52.97	52.25
Solyc05g026220.1.1	Tomato	cytosol	31.05	42.5
Solyc05g006730.2.1	Tomato	mitochondrion	42.47	41.33
Solyc05g006740.2.1	Tomato	cytosol	39.73	40.65
Solyc05g006750.2.1	Tomato	cytosol	41.1	39.3
Solyc05g026210.1.1	Tomato	nucleus	38.36	36.52

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987
GO:GO:0016740	GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	UniProt:K4CGI3	PFAM:PF02798	PFAM:PF13410	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833	EnsemblPlantsGene:Solyc07g056510.2	EnsemblPlants:Solyc07g056510.2.1
InterPro:Thioredoxin-like_sf	UniParc:UPI000276B25F	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:-:64308885..64310376

Molecular Weight (calculated)

25418.9 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.263

Length

219 amino acids

Sequence
(BLAST)

001: MGDEVVLLDL WVSPFGMRVR IALKEKGINY ESKEENLSNK SSLLLKMNPI HKQIPVLIHN GKPICESLII VQYIDEVWKD KAPLLPSDPY ERAHAKFWAD
101: YVDKKIYSTG RLVWTTKGEA QEAAKKELIH HFKLLEKELG DKTFFGGDQF GLVDIALIPF YSWFYALETC GNFSMIHECP KLVEWAKRCM ERESVSTSLP
201: DQYKVYDFIL ELKKKLDLD

Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)

001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE

Arabidopsis Description

GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.