Factsheet for Solyc02g081240.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400094585	Potato	cytosol	95.5	95.93
VIT_04s0079g00360.t01	Wine grape	cytosol	68.47	69.09
KRH72918	Soybean	cytosol	62.61	62.9
KRH17272	Soybean	cytosol	62.16	62.44
Solyc07g056490.2.1	Tomato	extracellular	54.5	55.25
Solyc07g056430.2.1	Tomato	cytosol	34.68	55.0
Solyc07g056440.2.1	Tomato	cytosol	54.5	54.5
GSMUA_Achr10P...	Banana	cytosol	54.5	54.26
Solyc07g056480.2.1	Tomato	cytosol, plastid	53.15	53.64
TraesCS5D01G432600.1	Wheat	cytosol	53.15	53.15
TraesCS5B01G426300.1	Wheat	endoplasmic reticulum	53.15	53.15
Solyc07g056510.2.1	Tomato	cytosol	52.25	52.97
TraesCS5D01G432700.1	Wheat	cytosol	49.1	52.91
HORVU5Hr1G103430.2	Barley	cytosol	52.7	52.7
TraesCS5B01G426400.1	Wheat	golgi	52.7	52.7
TraesCS5A01G424000.1	Wheat	cytosol	43.24	52.46
Solyc07g056460.2.1	Tomato	plastid	51.8	52.27
Solyc10g007640.2.1	Tomato	cytosol	51.8	52.04
GSMUA_Achr9P26040_001	Banana	cytosol	52.25	52.02
Solyc07g056470.2.1	Tomato	plastid	51.35	51.82
Solyc07g056420.2.1	Tomato	extracellular	51.35	51.82
Solyc07g056450.2.1	Tomato	cytosol	32.43	51.8
TraesCS2B01G609500.1	Wheat	cytosol	50.0	51.63
Solyc12g011300.1.1	Tomato	cytosol	50.9	51.36
TraesCS2A01G578300.1	Wheat	cytosol	49.55	51.16
GSMUA_Achr9P26050_001	Banana	cytosol	50.45	51.14
TraesCS2D01G589500.1	Wheat	cytosol	49.1	50.7
Solyc12g011310.1.1	Tomato	plastid	50.0	50.68
TraesCS5A01G424100.1	Wheat	golgi	50.45	50.45
HORVU2Hr1G124310.1	Barley	cytosol	48.65	50.23
GSMUA_Achr9P26030_001	Banana	cytosol	50.9	50.22
EER90776	Sorghum	cytosol	50.9	50.0
TraesCS3B01G409200.1	Wheat	cytosol	50.45	50.0
Zm00001d034356_P001	Maize	cytosol, extracellular	50.45	50.0
EER97476	Sorghum	cytosol	51.35	50.0
TraesCS3D01G369600.1	Wheat	cytosol	49.55	49.11
Zm00001d018809_P001	Maize	extracellular	49.1	49.1
EER93341	Sorghum	cytosol	47.75	48.4
TraesCS3A01G376700.1	Wheat	cytosol	48.65	48.0
Solyc10g007620.1.1	Tomato	cytosol	46.4	47.03
HORVU5Hr1G103420.1	Barley	cytosol	52.25	46.96
Os07t0468100-01	Rice	plasma membrane	48.65	46.55
Zm00001d036951_P001	Maize	cytosol	45.95	45.33
Os09t0367700-01	Rice	cytosol	47.3	45.06
Os03t0785900-01	Rice	cytosol	46.85	45.02
TraesCS5B01G376800.1	Wheat	cytosol	43.69	44.09
EER90777	Sorghum	cytosol	45.05	43.67
OQU89319	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.79	42.99
EER89978	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.14	42.98
Solyc12g011320.1.1	Tomato	cytosol	42.34	42.92
EER91171	Sorghum	cytosol	45.05	42.55
Zm00001d013693_P001	Maize	cytosol	43.24	42.48
TraesCS5D01G384400.1	Wheat	cytosol	42.34	42.34
TraesCS5A01G374800.1	Wheat	cytosol	41.89	41.89
HORVU5Hr1G092970.2	Barley	cytosol	31.98	41.76
GSMUA_Achr9P26020_001	Banana	cytosol	42.34	41.05
Os03t0643700-01	Rice	cytosol	40.99	39.22
Solyc05g006730.2.1	Tomato	mitochondrion	36.94	36.44
Solyc05g006740.2.1	Tomato	cytosol	34.23	35.51
Solyc05g026220.1.1	Tomato	cytosol	25.23	35.0
Solyc05g026210.1.1	Tomato	nucleus	35.14	33.91
Solyc05g006750.2.1	Tomato	cytosol	34.23	33.19
HORVU3Hr1G083520.1	Barley	cytosol	34.23	29.92
GSMUA_Achr9P26060_001	Banana	cytosol	52.25	26.67
GSMUA_Achr9P26080_001	Banana	cytosol	51.35	25.33
GSMUA_Achr9P26070_001	Banana	cytosol	49.55	13.99

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987
GO:GO:0016740	GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	UniProt:K4B9Z4	PFAM:PF02798	PFAM:PF13410	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF482	SUPFAM:SSF47616	SUPFAM:SSF52833	EnsemblPlantsGene:Solyc02g081240.1	EnsemblPlants:Solyc02g081240.1.1
InterPro:Thioredoxin-like_sf	UniParc:UPI00027675C9	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:+:45268425..45269371

Molecular Weight (calculated)

25529.9 Da

IEP (calculated)

4.922

GRAVY (calculated)

-0.255

Length

222 amino acids

Sequence
(BLAST)

001: MSKDDELRLL DFWASPFCMR VKIALSEKGV AYESQQEDLF GGKSDMLLKS NPIYEKVPVL LDNGKPIVES NNIVYYIEDK YPSTNPLLPS CAYGRSRARF
101: WADFIDKKIF EGGMCIWKSK GEELEIAKKD FIEILKKLEG AMGDKDFFGG DNFGYVDVIA IAMTSWFHAY EVFGDFKVEQ ECPKFGCWMK RCLERESVSS
201: VLPDPEKIYQ CVVMLRKMHG IE

Best Arabidopsis Sequence Match ( AT1G17180.1 )
(BLAST)

001: MADEVILLDF WPSMFGMRTR IALEEKNVKF DYREQDLWNK SPILLEMNPV HKKIPVLIHN GNPVCESLIQ IEYIDEVWPS KTPLLPSDPY QRAQAKFWGD
101: FIDKKVYASA RLIWGAKGEE HEAGKKEFIE ILKTLESELG DKTYFGGETF GYVDIALIGF YSWFEAYEKF GSFSIEAECP KLIAWGKRCV ERESVAKSLP
201: DSEKIIKFVP ELRKKLGIEI E

Arabidopsis Description

GSTU25Glutathione S-transferase U25 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.