Factsheet for TraesCS5A01G424100.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G432700.1	Wheat	cytosol	91.44	98.54
TraesCS5B01G426400.1	Wheat	golgi	96.85	96.85
HORVU5Hr1G103430.2	Barley	cytosol	93.69	93.69
TraesCS5A01G424000.1	Wheat	cytosol	68.92	83.61
TraesCS3A01G376700.1	Wheat	cytosol	70.27	69.33
Os03t0785900-01	Rice	cytosol	70.27	67.53
OQU89319	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	67.12	67.42
GSMUA_Achr9P26040_001	Banana	cytosol	65.77	65.47
GSMUA_Achr10P...	Banana	cytosol	64.86	64.57
TraesCS2A01G578300.1	Wheat	cytosol	61.71	63.72
GSMUA_Achr9P26030_001	Banana	cytosol	63.96	63.11
GSMUA_Achr9P26050_001	Banana	cytosol	57.21	57.99
VIT_04s0079g00360.t01	Wine grape	cytosol	51.8	52.27
Solyc02g081240.1.1	Tomato	cytosol	50.45	50.45
GSMUA_Achr9P26020_001	Banana	cytosol	51.35	49.78
PGSC0003DMT400094585	Potato	cytosol	49.1	49.32
TraesCS5A01G374800.1	Wheat	cytosol	47.75	47.75
KRH17272	Soybean	cytosol	47.3	47.51
KRH72918	Soybean	cytosol	47.3	47.51
TraesCS2A01G577900.1	Wheat	cytosol	46.4	45.98
TraesCS2A01G578400.1	Wheat	cytosol	45.05	45.87
TraesCS2A01G578000.1	Wheat	cytosol	45.5	45.7
TraesCS2A01G578200.1	Wheat	cytosol	46.4	44.4
TraesCS4A01G435300.1	Wheat	cytosol	43.69	42.92
TraesCS7A01G049400.1	Wheat	cytosol	43.24	41.92
TraesCS1A01G186100.1	Wheat	cytosol, extracellular	43.24	41.2
TraesCS1A01G186200.1	Wheat	cytosol	41.44	40.35
TraesCS4A01G454800.1	Wheat	cytosol	44.14	40.33
TraesCS1A01G186600.1	Wheat	cytosol	42.34	40.0
TraesCS4A01G008400.1	Wheat	cytosol	43.24	40.0
TraesCS1A01G186700.1	Wheat	cytosol	41.89	39.74
TraesCS1A01G186800.1	Wheat	cytosol	40.99	39.57
TraesCS6A01G139000.1	Wheat	cytosol	40.54	39.47
TraesCS1A01G186500.1	Wheat	cytosol	41.44	38.98
TraesCS3A01G260800.1	Wheat	cytosol	41.44	38.98
TraesCS3A01G021200.1	Wheat	cytosol	41.89	38.91
TraesCS1A01G187000.1	Wheat	cytosol	41.44	38.82
TraesCS1A01G017300.1	Wheat	cytosol	40.54	38.79
TraesCS4A01G454500.1	Wheat	cytosol	42.79	38.62
TraesCS4A01G455000.1	Wheat	mitochondrion	42.79	38.46
TraesCS1A01G017400.1	Wheat	cytosol	40.09	38.36
TraesCS7A01G477900.1	Wheat	golgi	40.54	38.3
TraesCS7A01G034500.1	Wheat	cytosol	37.84	38.18
TraesCS1A01G016800.1	Wheat	cytosol	40.54	38.14
TraesCS2A01G218700.1	Wheat	cytosol	40.99	38.08
TraesCS7A01G034200.1	Wheat	cytosol, mitochondrion, plastid	42.34	37.9
TraesCS7A01G531100.1	Wheat	cytosol	40.09	37.87
TraesCS7A01G034300.1	Wheat	cytosol	41.44	37.86
TraesCS6A01G139100.1	Wheat	cytosol	39.19	37.83
TraesCS2A01G144300.1	Wheat	cytosol	37.39	37.73
TraesCS4A01G454700.1	Wheat	cytosol, mitochondrion, plastid	41.89	37.65
TraesCS7A01G129500.1	Wheat	cytosol	36.04	37.04
TraesCS5A01G190900.1	Wheat	cytosol	38.29	36.8
TraesCS4A01G429800.1	Wheat	cytosol	38.74	36.75
TraesCS3A01G437400.1	Wheat	cytosol	38.29	36.48
TraesCS3A01G437900.1	Wheat	cytosol	38.29	36.32
TraesCS2A01G504300.2	Wheat	cytosol	45.05	36.23
TraesCS7A01G059900.1	Wheat	cytosol	37.84	35.74
TraesCS4A01G429900.1	Wheat	cytosol	37.84	35.59
TraesCS3A01G437500.1	Wheat	cytosol	37.39	35.47
TraesCS7A01G132000.1	Wheat	cytosol	37.84	35.29
TraesCS5A01G021700.1	Wheat	cytosol	37.39	35.17
TraesCS1A01G186400.1	Wheat	cytosol	36.94	34.6
TraesCS3A01G129800.1	Wheat	mitochondrion	43.24	33.68
TraesCS3A01G437600.1	Wheat	cytosol	35.59	33.62
TraesCS1A01G186300.1	Wheat	cytosol	40.09	33.09
GSMUA_Achr9P26060_001	Banana	cytosol	59.46	30.34
TraesCS2A01G544400.1	Wheat	cytosol	34.68	29.39
GSMUA_Achr9P26080_001	Banana	cytosol	56.76	28.0
GSMUA_Achr9P26070_001	Banana	cytosol	58.11	16.41

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF13410
PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF480	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS5A01G424100	EnsemblPlants:TraesCS5A01G424100.1	TIGR:cd03058	TIGR:cd03185

Description

No Description!

Coordinates

chr5A:+:609812913..609813821

Molecular Weight (calculated)

25015.0 Da

IEP (calculated)

6.796

GRAVY (calculated)

-0.245

Length

222 amino acids

Sequence
(BLAST)

001: MAGEKGLVLL DFWVSPFGQR VRIALAEKGL PYEYAEEDLM AGKSDRLLRA NPVHKKIPVL LHDGRAVNES LIILQYLEEA FPDAPALLPS DPYARAQARF
101: WADYVDKKVY DCGSRLWKLK GEPQAQARAE MLDILKTLDG ALGDKPFFGG EKFGFVDAAF APFTAWFHSY ERYGEFSLPE VAPKIAAWAK RCGERESVAK
201: SLYSPDKVYD FIGLLKKKYG IE

Best Arabidopsis Sequence Match ( AT1G78380.1 )
(BLAST)

001: MANEVILLDF WPSMFGMRTR IALREKGVEF EYREEDLRNK SPLLLQMNPI HKKIPVLIHN GKPVNESIIQ VQYIDEVWSH KNPILPSDPY LRAQARFWAD
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE

Arabidopsis Description

GSTU19GSTU19 [Source:UniProtKB/TrEMBL;Acc:A0A178W4K6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.