Factsheet for TraesCS5B01G426400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 23128297
golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G432700.1	Wheat	cytosol	90.99	98.06
HORVU5Hr1G103430.2	Barley	cytosol	96.85	96.85
TraesCS5A01G424100.1	Wheat	golgi	96.85	96.85
TraesCS5B01G426300.1	Wheat	endoplasmic reticulum	88.29	88.29
TraesCS3B01G409200.1	Wheat	cytosol	71.17	70.54
Os03t0785900-01	Rice	cytosol	72.07	69.26
OQU89319	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.67	66.97
GSMUA_Achr9P26040_001	Banana	cytosol	66.67	66.37
GSMUA_Achr10P...	Banana	cytosol	65.32	65.02
GSMUA_Achr9P26030_001	Banana	cytosol	63.96	63.11
TraesCS2B01G609500.1	Wheat	cytosol	60.81	62.79
GSMUA_Achr9P26050_001	Banana	cytosol	58.56	59.36
TraesCS1B01G194600.1	Wheat	cytosol	29.28	57.02
VIT_04s0079g00360.t01	Wine grape	cytosol	53.15	53.64
Solyc02g081240.1.1	Tomato	cytosol	52.7	52.7
PGSC0003DMT400094585	Potato	cytosol	51.35	51.58
TraesCS5B01G376800.1	Wheat	cytosol	50.9	51.36
GSMUA_Achr9P26020_001	Banana	cytosol	52.25	50.66
KRH17272	Soybean	cytosol	48.65	48.87
KRH72918	Soybean	cytosol	48.65	48.87
TraesCS2B01G609400.1	Wheat	cytosol	47.3	46.46
TraesCS6B01G167300.1	Wheat	cytosol	41.44	44.02
TraesCS6B01G167400.1	Wheat	cytosol	43.24	43.05
TraesCS6B01G167500.1	Wheat	cytosol	43.69	42.17
TraesCS6B01G167600.1	Wheat	cytosol	42.79	41.3
TraesCS4B01G296500.1	Wheat	cytosol	43.69	41.28
TraesCS1B01G194000.1	Wheat	cytosol	43.24	41.2
TraesCS1B01G021100.1	Wheat	cytosol	42.79	41.13
TraesCS7B01G029300.1	Wheat	cytosol	42.79	40.95
TraesCS1B01G194900.1	Wheat	cytosol	43.24	40.51
TraesCS1B01G021400.1	Wheat	cytosol	42.79	40.25
TraesCS3B01G234100.1	Wheat	cytosol	42.79	40.25
TraesCS7B01G380300.1	Wheat	extracellular	42.34	40.0
TraesCS1B01G194500.1	Wheat	cytosol	41.89	39.57
TraesCS1B01G194300.1	Wheat	cytosol	41.44	39.15
TraesCS5B01G192400.1	Wheat	cytosol	40.54	38.96
TraesCS3B01G025000.1	Wheat	cytosol	41.89	38.91
TraesCS1B01G194700.1	Wheat	cytosol	41.44	38.82
TraesCS1B01G194400.1	Wheat	cytosol	40.99	38.56
TraesCS2B01G244100.1	Wheat	cytosol	41.44	38.49
TraesCS7B01G058000.1	Wheat	cytosol	40.09	38.36
TraesCS4B01G225200.1	Wheat	cytosol	40.09	38.2
TraesCS3B01G471500.1	Wheat	cytosol	39.64	37.77
TraesCS5B01G018400.1	Wheat	cytosol	40.09	37.71
TraesCS2B01G532600.1	Wheat	cytosol	45.95	37.5
TraesCS1B01G194200.1	Wheat	cytosol	37.39	37.39
TraesCS1B01G194800.1	Wheat	cytosol	41.89	37.35
TraesCS7B01G032700.1	Wheat	cytosol	39.64	37.29
TraesCS3B01G471600.1	Wheat	cytosol	38.74	36.75
TraesCS1B01G194100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.74	36.44
TraesCS3B01G471900.1	Wheat	cytosol	37.84	35.9
TraesCS6B01G429600.1	Wheat	cytosol	25.68	34.34
TraesCS7B01G057500.1	Wheat	cytosol	37.84	33.33
TraesCS2B01G574600.1	Wheat	cytosol	36.49	32.66
TraesCS6B01G429400.2	Wheat	plastid	43.24	32.11
GSMUA_Achr9P26060_001	Banana	cytosol	60.81	31.03
TraesCS2B01G523700.1	Wheat	plastid	40.54	30.41
GSMUA_Achr9P26080_001	Banana	cytosol	58.11	28.67
TraesCS2B01G609600.1	Wheat	plastid	46.4	26.96
TraesCS2B01G574500.1	Wheat	cytosol	36.04	22.04
GSMUA_Achr9P26070_001	Banana	cytosol	59.46	16.79

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF13410
PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF480	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS5B01G426400	EnsemblPlants:TraesCS5B01G426400.1	TIGR:cd03058	TIGR:cd03185
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:602138012..602138904

Molecular Weight (calculated)

25045.1 Da

IEP (calculated)

6.796

GRAVY (calculated)

-0.246

Length

222 amino acids

Sequence
(BLAST)

001: MAGEKGLVLL DFWVSPFGQR VRIALAEKGL PYEYVEEDLM AGKSDRLLRS NPVHKKIPVL LHDGRPVNES LIILQYLEDA FPDAPALLPS DPYARAQARF
101: WADYVDKKVY DCGSRLWKLK GEPQAQARAE MLEILKTLDG ALGDKPFFGG DKFGFVDAAF APFTAWFHSY ERYGEFSLAE VAPKIAAWAK RCGERESVAK
201: SLYSPDKVYD FIGLLKKKYG IE

Best Arabidopsis Sequence Match ( AT1G78380.1 )
(BLAST)

001: MANEVILLDF WPSMFGMRTR IALREKGVEF EYREEDLRNK SPLLLQMNPI HKKIPVLIHN GKPVNESIIQ VQYIDEVWSH KNPILPSDPY LRAQARFWAD
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE

Arabidopsis Description

GSTU19GSTU19 [Source:UniProtKB/TrEMBL;Acc:A0A178W4K6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.