Factsheet for TraesCS3B01G409200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G376700.1	Wheat	cytosol	95.09	94.67
TraesCS3D01G369600.1	Wheat	cytosol	94.64	94.64
Zm00001d036951_P001	Maize	cytosol	71.88	71.56
TraesCS5B01G426400.1	Wheat	golgi	70.54	71.17
Os07t0468100-01	Rice	plasma membrane	72.77	70.26
TraesCS5B01G426300.1	Wheat	endoplasmic reticulum	67.41	68.02
EER89978	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.3	67.11
GSMUA_Achr9P26040_001	Banana	cytosol	62.5	62.78
TraesCS2B01G609500.1	Wheat	cytosol	59.38	61.86
GSMUA_Achr9P26030_001	Banana	cytosol	62.05	61.78
GSMUA_Achr10P...	Banana	cytosol	59.82	60.09
VIT_04s0079g00360.t01	Wine grape	cytosol	54.02	55.0
HORVU3Hr1G083520.1	Barley	cytosol	62.05	54.72
GSMUA_Achr9P26050_001	Banana	cytosol	53.12	54.34
TraesCS1B01G194600.1	Wheat	cytosol	27.23	53.51
GSMUA_Achr9P26020_001	Banana	cytosol	52.23	51.09
TraesCS5B01G376800.1	Wheat	cytosol	49.55	50.45
Solyc02g081240.1.1	Tomato	cytosol	50.0	50.45
PGSC0003DMT400094585	Potato	cytosol	48.66	49.32
KRH17272	Soybean	cytosol	46.88	47.51
KRH72918	Soybean	cytosol	46.88	47.51
TraesCS2B01G609400.1	Wheat	cytosol	45.98	45.58
TraesCS4B01G296500.1	Wheat	cytosol	42.86	40.85
TraesCS3B01G234100.1	Wheat	cytosol	42.86	40.68
TraesCS6B01G167300.1	Wheat	cytosol	37.5	40.19
TraesCS6B01G167400.1	Wheat	cytosol	39.73	39.91
TraesCS3B01G471900.1	Wheat	cytosol	41.52	39.74
TraesCS1B01G194500.1	Wheat	cytosol	41.52	39.57
TraesCS1B01G194000.1	Wheat	cytosol	41.07	39.48
TraesCS1B01G021100.1	Wheat	cytosol	40.62	39.39
TraesCS1B01G194400.1	Wheat	cytosol	41.07	38.98
TraesCS1B01G021400.1	Wheat	cytosol	41.07	38.98
TraesCS6B01G167500.1	Wheat	cytosol	39.73	38.7
TraesCS3B01G025000.1	Wheat	cytosol	41.07	38.49
TraesCS1B01G194700.1	Wheat	cytosol	40.62	38.4
TraesCS7B01G029300.1	Wheat	cytosol	39.73	38.36
TraesCS6B01G167600.1	Wheat	cytosol	39.29	38.26
TraesCS7B01G032700.1	Wheat	cytosol	40.18	38.14
TraesCS5B01G018400.1	Wheat	cytosol	40.18	38.14
TraesCS2B01G244100.1	Wheat	cytosol	40.62	38.08
TraesCS5B01G192400.1	Wheat	cytosol	38.84	37.66
TraesCS7B01G058000.1	Wheat	cytosol	38.84	37.5
TraesCS1B01G194300.1	Wheat	cytosol	39.29	37.45
TraesCS3B01G471500.1	Wheat	cytosol	38.39	36.91
TraesCS3B01G471600.1	Wheat	cytosol	37.95	36.32
TraesCS1B01G194800.1	Wheat	cytosol	40.18	36.14
TraesCS4B01G225200.1	Wheat	cytosol	36.61	35.19
TraesCS1B01G194100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.05	35.17
TraesCS1B01G194200.1	Wheat	cytosol	34.82	35.14
TraesCS1B01G194900.1	Wheat	cytosol	37.05	35.02
TraesCS2B01G532600.1	Wheat	cytosol	42.41	34.93
TraesCS7B01G380300.1	Wheat	extracellular	36.61	34.89
TraesCS6B01G429600.1	Wheat	cytosol	24.55	33.13
TraesCS7B01G057500.1	Wheat	cytosol	36.61	32.54
TraesCS2B01G574600.1	Wheat	cytosol	34.82	31.45
TraesCS6B01G429400.2	Wheat	plastid	40.62	30.43
TraesCS2B01G523700.1	Wheat	plastid	38.39	29.05
GSMUA_Achr9P26060_001	Banana	cytosol	55.36	28.51
TraesCS2B01G609600.1	Wheat	plastid	46.43	27.23
GSMUA_Achr9P26080_001	Banana	cytosol	53.57	26.67
TraesCS2B01G574500.1	Wheat	cytosol	37.05	22.86
GSMUA_Achr9P26070_001	Banana	cytosol	56.7	16.16

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF13410
PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF234	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS3B01G409200	EnsemblPlants:TraesCS3B01G409200.1	TIGR:cd03058	TIGR:cd03185

Description

No Description!

Coordinates

chr3B:+:644839415..644840290

Molecular Weight (calculated)

25010.0 Da

IEP (calculated)

5.200

GRAVY (calculated)

-0.107

Length

224 amino acids

Sequence
(BLAST)

001: MAGEKTGLVL LDFWVSPFAQ RCRIALAEKG LACESLEQEL LGAKSDLLLG SNPVHKKVPV LLHDGRAVCE SLVILEYIED AFPGAAPLLL PTDPHARAQA
101: RFWADYVDKR VYSCGTRLWK LKGEERAAAR ADMLETLRTL DAELGDKAFF GGEAFGFVDV TLIPLTSWFY SYEKHGGFSV EEECPRLAEW ARRCGERETV
201: AKVLTPPEEV HDFIGLLKKH YGLE

Best Arabidopsis Sequence Match ( AT1G53680.1 )
(BLAST)

001: MGKENSKVVV LDFWASPYAM RTKVALREKG VEFEVQEEDL WNKSELLLKS NPVHKKVPVL IHNNTPISES LIQVQYIDET WTDAASFLPS DPQSRATARF
101: WADYADKTIS FEGGRKIWGN KKGEEQEKGK KEFLESLKVL EAELGDKSYF GGETFGYVDI TLVPFYSWFY ALEKCGDFSV EAECPKIVAW GKRCVERNSV
201: AATLPESEKV YQQVLKLRQI FGVE

Arabidopsis Description

GSTU28Glutathione S-transferase U28 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.