CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97476	Sorghum	cytosol	58.08	58.33
EER90776	Sorghum	cytosol	57.21	57.96
OQU89319	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.02	57.01
EER89978	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.9	56.14
EER93341	Sorghum	cytosol	52.4	54.79
EER91171	Sorghum	cytosol	55.46	54.04
GSMUA_Achr9P26040_001	Banana	cytosol	48.91	50.22
GSMUA_Achr10P...	Banana	cytosol	47.16	48.43
GSMUA_Achr9P26030_001	Banana	cytosol	46.72	47.56
VIT_04s0079g00360.t01	Wine grape	cytosol	45.41	47.27
GSMUA_Achr9P26050_001	Banana	cytosol	44.98	47.03
PGSC0003DMT400094585	Potato	cytosol	43.67	45.25
Solyc02g081240.1.1	Tomato	cytosol	43.67	45.05
KRH72918	Soybean	cytosol	42.79	44.34
KRH17272	Soybean	cytosol	42.79	44.34
GSMUA_Achr9P26020_001	Banana	cytosol	43.67	43.67
EER94599	Sorghum	cytosol	43.67	42.55
EER94598	Sorghum	cytosol	42.36	42.54
EES03469	Sorghum	cytosol	44.1	42.44
EES08965	Sorghum	endoplasmic reticulum	42.79	42.06
OQU92262	Sorghum	cytosol	44.1	41.56
EER94596	Sorghum	cytosol	41.92	41.38
EER92032	Sorghum	cytosol	42.36	41.1
EER94618	Sorghum	cytosol	38.86	40.83
EER94597	Sorghum	cytosol	40.61	40.61
EER95876	Sorghum	cytosol	38.86	40.09
EES00904	Sorghum	mitochondrion	41.92	39.83
EES03470	Sorghum	cytosol	41.48	39.75
EER94613	Sorghum	cytosol	40.61	39.74
EER94605	Sorghum	cytosol	40.61	39.41
EER94614	Sorghum	cytosol	41.92	39.34
EES03468	Sorghum	cytosol	42.36	38.96
EER94606	Sorghum	cytosol	39.74	38.56
EER94615	Sorghum	cytosol	40.17	38.49
KXG39035	Sorghum	cytosol	40.17	38.33
EER94619	Sorghum	cytosol	39.3	37.82
EER94604	Sorghum	cytosol	39.3	37.66
EER92030	Sorghum	cytosol	38.43	36.97
EES13278	Sorghum	cytosol	39.74	35.69
OQU86987	Sorghum	cytosol	39.74	35.55
EER94607	Sorghum	cytosol	36.24	35.02
EES00905	Sorghum	cytosol	36.24	35.02
EER92034	Sorghum	endoplasmic reticulum	33.62	33.19
EER92036	Sorghum	cytosol	33.19	32.34
OQU92261	Sorghum	cytosol	39.74	32.16
EER92035	Sorghum	cytosol	33.62	31.95
GSMUA_Achr9P26060_001	Banana	cytosol	46.72	24.6
GSMUA_Achr9P26080_001	Banana	cytosol	48.03	24.44
GSMUA_Achr9P26070_001	Banana	cytosol	45.41	13.23

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:8084145	UniProt:C5WY76	EnsemblPlants:EER90777
ProteinID:EER90777	ProteinID:EER90777.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740
GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF13410	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF234
EnsemblPlantsGene:SORBI_3001G066000	SUPFAM:SSF47616	SUPFAM:SSF52833	unigene:Sbi.6723	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A821FE
RefSeq:XP_002463779.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:5024430..5025262

Molecular Weight (calculated)

25339.1 Da

IEP (calculated)

5.195

GRAVY (calculated)

-0.180

Length

229 amino acids

Sequence
(BLAST)

001: MAGAESGSDL VLLDVFASPY AQRVRIALAE KGLAYESTEE DLAAKSDLLR RSNPAHGGKV PVLLHAGRPV CESLVILEYL DDAFPATPPL LPTDPYARAQ
101: ARFWAEYAGR AHLCGKRLWL RRDGEEAEPE PEARAEMLAV LRTLDAELGG REFFGGEAFG FVDVAAVPFA SWFLTYERHG RFAMAEECPG LAAWAARCAR
201: RDSVAANVYP PEKVYQRVLE YRQWVLGPK

Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)

001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE

Arabidopsis Description

GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.