CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048558_P001	Maize	cytosol	81.47	83.26
Zm00001d029708_P001	Maize	extracellular	81.03	81.39
TraesCS1D01G191100.1	Wheat	cytosol, extracellular	76.72	76.39
TraesCS1A01G186100.1	Wheat	cytosol, extracellular	75.86	75.54
Os10t0530900-01	Rice	extracellular, plasma membrane	71.98	70.76
Os10t0531400-01	Rice	plasma membrane	69.4	68.51
EER94598	Sorghum	cytosol	62.5	63.6
EER94597	Sorghum	cytosol	60.34	61.14
HORVU1Hr1G049280.1	Barley	cytosol, plastid	76.72	58.75
EER92032	Sorghum	cytosol	56.47	55.51
EES08965	Sorghum	endoplasmic reticulum	55.6	55.36
EER94618	Sorghum	cytosol	50.0	53.21
EER94615	Sorghum	cytosol	54.74	53.14
EER94599	Sorghum	cytosol	52.16	51.49
EER92030	Sorghum	cytosol	52.16	50.84
KXG39035	Sorghum	cytosol	52.16	50.42
EER94614	Sorghum	cytosol	53.02	50.41
EES00904	Sorghum	mitochondrion	52.16	50.21
EER94619	Sorghum	cytosol	51.29	50.0
EER94613	Sorghum	cytosol	50.43	50.0
EER94605	Sorghum	cytosol	50.86	50.0
EES03470	Sorghum	cytosol	51.29	49.79
EES03469	Sorghum	cytosol	50.86	49.58
EER94607	Sorghum	cytosol	49.57	48.52
EER94606	Sorghum	cytosol	49.14	48.31
OQU92262	Sorghum	cytosol	50.0	47.74
EER94604	Sorghum	cytosol	48.71	47.28
EES13278	Sorghum	cytosol	51.29	46.67
EES00905	Sorghum	cytosol	46.12	45.15
EES03468	Sorghum	cytosol	48.28	44.98
EER92036	Sorghum	cytosol	44.4	43.83
OQU86987	Sorghum	cytosol	48.28	43.75
EER92034	Sorghum	endoplasmic reticulum	43.53	43.53
EER97476	Sorghum	cytosol	41.81	42.54
OQU92261	Sorghum	cytosol	51.72	42.4
EER92035	Sorghum	cytosol	43.97	42.32
EER90777	Sorghum	cytosol	41.38	41.92
EER90776	Sorghum	cytosol	40.52	41.59
EER93341	Sorghum	cytosol	38.79	41.1
EER91171	Sorghum	cytosol	40.52	40.0
EER89978	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.93	38.6
OQU89319	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.21	38.01
EER95876	Sorghum	cytosol	34.48	36.04

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:8062880	UniProt:C5WUH1	EnsemblPlants:EER94596
ProteinID:EER94596	ProteinID:EER94596.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740
GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF13410	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF326
EnsemblPlantsGene:SORBI_3001G317000	SUPFAM:SSF47616	SUPFAM:SSF52833	unigene:Sbi.10790	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf
UniParc:UPI0001A830A2	RefSeq:XP_002467598.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:60531076..60532263

Molecular Weight (calculated)

25025.0 Da

IEP (calculated)

4.738

GRAVY (calculated)

0.125

Length

232 amino acids

Sequence
(BLAST)

001: MAGAGNADDP KLLGVWTSPF VIRVRIVLNL KGLAYEYVEE DLGSKSALLV GSNPVHKTVP VLLHGGRAIN ESQIILQYID EVYSGTGPAV LPSDPYERAT
101: ARFWAAYIDD KVRSAWLGMV FTCKDEEERA EAVARAGEAL DTLEGAFGEC TEAGKKPFFG GDGIGFVDVV LGGYLGWFGA VAKIIGRRVI DPARTPLLAA
201: WEDRFRAADV AKGVVPDDVD KVLAFLQVLL AR

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.