Factsheet for Os10t0530900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

extracellular: 18986194
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18986194 doi

YH Jung, SH Jeong, SH Kim, R Singh, JE Lee, YS Cho, GK Agrawal, R Rakwal, NS Jwa

Department of Molecular Biology, Sejong University, Gunja-dong, Seoul 143-747, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G186100.1	Wheat	cytosol, extracellular	82.2	83.26
TraesCS1D01G191100.1	Wheat	cytosol, extracellular	81.78	82.83
Os10t0531400-01	Rice	plasma membrane	81.78	82.13
Zm00001d029708_P001	Maize	extracellular	70.76	72.29
Zm00001d048558_P001	Maize	cytosol	69.49	72.25
EER94596	Sorghum	cytosol	70.76	71.98
HORVU1Hr1G049280.1	Barley	cytosol, plastid	82.2	64.03
Os10t0528100-01	Rice	plasma membrane	58.05	59.05
Os10t0529700-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	58.05	58.55
Os10t0528900-01	Rice	cytosol	55.93	57.14
Os10t0528200-01	Rice	mitochondrion, plasma membrane	56.78	57.02
Os10t0528400-01	Rice	plastid	55.93	56.65
Os10t0527400-01	Rice	cytosol	56.36	55.65
Os10t0527800-01	Rice	plasma membrane	54.24	54.94
Os10t0528300-01	Rice	cytosol	55.51	54.81
Os10t0529300-01	Rice	cytosol, plasma membrane, plastid	55.93	54.32
Os10t0530400-01	Rice	plasma membrane	54.66	53.53
Os10t0529400-01	Rice	cytosol, mitochondrion	54.24	53.33
Os10t0529500-01	Rice	cytosol	53.39	52.94
Os07t0168300-01	Rice	cytosol	52.54	52.77
Os10t0530600-01	Rice	cytosol	52.97	51.44
Os10t0530200-01	Rice	cytosol, extracellular	50.85	51.06
Os01t0692100-01	Rice	mitochondrion	51.27	51.05
Os10t0529800-00	Rice	cytosol	50.0	49.79
Os10t0527601-00	Rice	cytosol	53.39	49.03
Os10t0481300-01	Rice	cytosol	41.95	48.53
Os10t0525800-00	Rice	cytosol	44.49	48.17
Os01t0558100-01	Rice	cytosol	50.85	48.0
Os10t0525500-01	Rice	cytosol, plastid	29.24	47.92
Os10t0365200-00	Rice	cytosol, plasma membrane	48.31	45.97
Os10t0525400-01	Rice	cytosol, plastid	45.34	43.85
Os07t0468100-01	Rice	plasma membrane	42.37	43.1
Os09t0367700-01	Rice	cytosol	41.95	42.49
Os03t0785900-01	Rice	cytosol	40.25	41.13
Os10t0368100-01	Rice	cytosol	22.46	39.55
Os03t0643700-01	Rice	cytosol	37.71	38.36
Os07t0152700-00	Rice	cytosol	27.97	33.5

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:4349207	ProteinID:AAM94535.1	ProteinID:AAP54769.1
EMBL:AF309376	EMBL:AK059760	EMBL:AK103699	ProteinID:BAF27055.1	ProteinID:BAT11780.1	ProteinID:BAT11781.1
EMBL:D10861	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	EnsemblPlantsGene:Os10g0530900
EnsemblPlants:Os10t0530900-01	PFAM:PF13410	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260
PANTHER:PTHR11260:SF326	UniProt:Q06398	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00000A2911
RefSeq:XP_015614356.1	SEG:seg	:	:	:	:

Description

TAU GLUTATHIONE S-TRANSFERASE 50Similar to Glutathione S-transferase GST 30 (EC 2.5.1.18). (Os10t0530900-01);Similar to cDNA clone:006-203-F02, full insert sequence. (Os10t0530900-03)

Coordinates

chr10:+:20633891..20634928

Molecular Weight (calculated)

25657.7 Da

IEP (calculated)

5.892

GRAVY (calculated)

-0.029

Length

236 amino acids

Sequence
(BLAST)

001: MAGSGELKLL GVWSSPYAIR VRVVLNLKSL PYEYVEENLG DKSDLLLASN PVHKSVPVLL HAGRPVNESQ VIVQYIDEVW PGGAGGRPSV MPSDPYERAV
101: ARFWAAYVDD KVRPAWLAIL FGSKTEEERA AAVAQAVAAL ETLEGAFGEC SKGKPFFGGD GVGFVDVVLG GYLGWFTAID KLIGRRLIDP ARTPALAAWE
201: ERFRATDAAK GVVPDDADKL LEFRQTLLRW SASKAK

Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)

001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA

Arabidopsis Description

GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.