Factsheet for Zm00001d029708_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048558_P001	Maize	cytosol	83.55	85.02
EER94596	Sorghum	cytosol	81.39	81.03
TraesCS1A01G186100.1	Wheat	cytosol, extracellular	77.06	76.39
TraesCS1D01G191100.1	Wheat	cytosol, extracellular	77.06	76.39
Os10t0530900-01	Rice	extracellular, plasma membrane	72.29	70.76
Os10t0531400-01	Rice	plasma membrane	70.56	69.36
Zm00001d029707_P001	Maize	cytosol, extracellular	61.04	61.84
HORVU1Hr1G049280.1	Barley	cytosol, plastid	77.92	59.41
Zm00001d029702_P001	Maize	cytosol, mitochondrion, plastid	32.9	59.38
Zm00001d029699_P002	Maize	extracellular	58.01	56.3
Zm00001d011154_P001	Maize	mitochondrion	54.55	53.16
Zm00001d048559_P001	Maize	cytosol, extracellular	53.68	52.77
Zm00001d029706_P001	Maize	extracellular	44.16	51.0
Zm00001d024963_P001	Maize	extracellular	51.08	50.86
Zm00001d043787_P001	Maize	cytosol, extracellular	51.95	50.21
Zm00001d029703_P001	Maize	cytosol	52.81	49.8
Zm00001d048560_P001	Maize	cytosol	51.95	49.79
Zm00001d043795_P001	Maize	extracellular	47.19	46.38
Zm00001d049657_P001	Maize	cytosol	48.05	46.25
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.02	46.22
Zm00001d043789_P003	Maize	cytosol	50.22	45.85
Zm00001d034356_P001	Maize	cytosol, extracellular	43.29	44.64
Zm00001d018809_P001	Maize	extracellular	42.86	44.59
Zm00001d029704_P001	Maize	cytosol, extracellular	51.95	44.12
Zm00001d029701_P001	Maize	plastid	51.95	41.81
Zm00001d027557_P001	Maize	cytosol	44.59	40.55
Zm00001d036951_P001	Maize	cytosol	37.66	38.67
Zm00001d013693_P001	Maize	cytosol	35.5	36.28

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:541841	EMBL:AF244695	EMBL:BT041091
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0016740
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	ProteinID:ONL99456.1
PFAM:PF13410	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF326
UniProt:Q9FQA9	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00000AA8F7	EnsemblPlantsGene:Zm00001d029708
EnsemblPlants:Zm00001d029708_P001	EnsemblPlants:Zm00001d029708_T001	SEG:seg	:	:	:

Description

glutathione transferase30 glutathione transferase30

Coordinates

chr1:+:83411025..83411720

Molecular Weight (calculated)

25225.4 Da

IEP (calculated)

5.130

GRAVY (calculated)

0.098

Length

231 amino acids

Sequence
(BLAST)

001: MAGGNDLKVL GVWTSPFVIR VRIVLNLKGL AYEYVEEDLG NKSALLLGSN PVHKSVPVLL HAGRAINESQ VILQYIDEVW AGTGPAVLPA DPYERAVARF
101: WGAYIDDKVE SAWLGMLFRC ANEEERAAAV ARAREALDAL EGAFRDCSRG RPFFGGDDIG FVDAVLGGYL GWFGAVGRII GSRLIDPART PLLAAWEDRF
201: RAADVAKGVV PDDLDKMLAF LQTLRAMNYA K

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.