Factsheet for Zm00001d024963_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08965	Sorghum	endoplasmic reticulum	77.59	77.25
TraesCS2B01G244100.1	Wheat	cytosol	69.4	67.36
HORVU2Hr1G045200.1	Barley	cytosol	69.4	66.81
TraesCS2D01G224700.1	Wheat	cytosol	68.97	66.67
TraesCS2A01G218700.1	Wheat	cytosol	68.1	66.11
Zm00001d029699_P002	Maize	extracellular	60.34	58.82
Zm00001d029707_P001	Maize	cytosol, extracellular	56.47	57.46
Zm00001d029704_P001	Maize	cytosol, extracellular	65.95	56.25
Zm00001d043787_P001	Maize	cytosol, extracellular	57.33	55.65
Zm00001d048560_P001	Maize	cytosol	57.76	55.6
Zm00001d029702_P001	Maize	cytosol, mitochondrion, plastid	30.17	54.69
Zm00001d043795_P001	Maize	extracellular	54.74	54.04
Zm00001d029703_P001	Maize	cytosol	56.9	53.88
Zm00001d048558_P001	Maize	cytosol	52.59	53.74
Zm00001d011154_P001	Maize	mitochondrion	53.88	52.74
Zm00001d048559_P001	Maize	cytosol, extracellular	52.59	51.91
Zm00001d029708_P001	Maize	extracellular	50.86	51.08
Zm00001d043789_P003	Maize	cytosol	54.74	50.2
Zm00001d029706_P001	Maize	extracellular	43.1	50.0
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.84	49.33
Zm00001d049657_P001	Maize	cytosol	50.86	49.17
Zm00001d029701_P001	Maize	plastid	58.19	47.04
Zm00001d034356_P001	Maize	cytosol, extracellular	43.97	45.54
Zm00001d018809_P001	Maize	extracellular	42.24	44.14
Zm00001d027557_P001	Maize	cytosol	47.84	43.7
Zm00001d013693_P001	Maize	cytosol	41.38	42.48
Zm00001d036951_P001	Maize	cytosol	40.95	42.22

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:542631	ProteinID:AQK42488.1	UniProt:B6TL20
ncoils:Coil	EMBL:EU965685	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0016740	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF232	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000182E2F7
EnsemblPlantsGene:Zm00001d024963	EnsemblPlants:Zm00001d024963_P001	EnsemblPlants:Zm00001d024963_T001	SEG:seg	:	:

Description

glutathione transferase22Glutathione S-transferase GSTU6

Coordinates

chr10:-:96969512..96970459

Molecular Weight (calculated)

25390.7 Da

IEP (calculated)

5.875

GRAVY (calculated)

0.150

Length

232 amino acids

Sequence
(BLAST)

001: MAGKELTLLG LWASPFVLRA RIALSLKGLT YAYSEENLDD KSELLLSSNP VLKKVPVLIH HGKPVCESQI IVQYVDEAFP AAAPNFLPSD PYDRAIARFW
101: ASYVDDKFYS AWIPVFRGRT AEEMAEAARQ AVAALETLEQ AFRECSKGKA FFGGDSVGLV DVVLGGLVGW LYATEAICGV KALDAGRTPL LAAWAERFCA
201: LEGVKGLIPD VDRLLEYTKA RRAVFGLPPL RP

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.