Factsheet for Zm00001d029701_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0528200-01	Rice	mitochondrion, plasma membrane	60.28	73.62
TraesCS1D01G190000.1	Wheat	cytosol	58.88	71.61
TraesCS1B01G194400.1	Wheat	cytosol	58.88	71.61
HORVU1Hr1G049230.2	Barley	cytosol	59.93	71.07
Os10t0528400-01	Rice	plastid	57.49	70.82
Zm00001d029702_P001	Maize	cytosol, mitochondrion, plastid	31.36	70.31
OQU92261	Sorghum	cytosol	68.64	69.61
Zm00001d029699_P002	Maize	extracellular	54.7	65.97
Os10t0529300-01	Rice	cytosol, plasma membrane, plastid	55.75	65.84
Os10t0528900-01	Rice	cytosol	52.96	65.8
Zm00001d029703_P001	Maize	cytosol	53.31	62.45
Zm00001d048560_P001	Maize	cytosol	51.57	61.41
Zm00001d048559_P001	Maize	cytosol, extracellular	47.74	58.3
Zm00001d024963_P001	Maize	extracellular	47.04	58.19
Zm00001d011154_P001	Maize	mitochondrion	46.34	56.12
Zm00001d029707_P001	Maize	cytosol, extracellular	43.9	55.26
Zm00001d049657_P001	Maize	cytosol	44.95	53.75
Zm00001d043787_P001	Maize	cytosol, extracellular	44.6	53.56
Zm00001d029708_P001	Maize	extracellular	41.81	51.95
Zm00001d048558_P001	Maize	cytosol	40.77	51.54
Zm00001d029706_P001	Maize	extracellular	35.54	51.0
Zm00001d043795_P001	Maize	extracellular	41.46	50.64
Zm00001d043789_P003	Maize	cytosol	42.16	47.83
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.28	47.56
Zm00001d029704_P001	Maize	cytosol, extracellular	43.9	46.32
Zm00001d034356_P001	Maize	cytosol, extracellular	33.45	42.86
Zm00001d018809_P001	Maize	extracellular	33.1	42.79
Zm00001d027557_P001	Maize	cytosol	36.93	41.73
Zm00001d013693_P001	Maize	cytosol	31.71	40.27
Zm00001d036951_P001	Maize	cytosol	31.01	39.56

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:A0A1D6K747	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	ProteinID:ONL99385.1	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260
PANTHER:PTHR11260:SF244	SUPFAM:SSF47616	SUPFAM:SSF52833	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	UniParc:UPI0002209E83
EnsemblPlantsGene:Zm00001d029701	EnsemblPlants:Zm00001d029701_P001	EnsemblPlants:Zm00001d029701_T001	SEG:seg	:	:

Description

glutathione transferase40 glutathione transferase40

Coordinates

chr1:+:83132970..83133833

Molecular Weight (calculated)

31425.6 Da

IEP (calculated)

5.676

GRAVY (calculated)

-0.043

Length

287 amino acids

Sequence
(BLAST)

001: MAGGGDDELK LLGAWASPFV LRVKLALSFK GLSYENVEED LSGSKSELLL ESNPVHKKVP VLLHNGKPVC ESQIIVQYID EAFAGTGGPS LLPADPHQRA
101: VARFWGAYID DKVVLLMLLM TLSFIFYLYY STYDLRRHEY DRCPMHIDGV RRRRTDASFP LQLLASWLQS ARAKTQEEKA DALKQALAAA ENLEAAFTEI
201: SEGKPFFGGD SVGYLDVTLG ALVAWVHAAE KLNGMRIFDA TRTPRLSAFV ERFGALGAAK AVLPDVDGLV EYAKQRQADA AAAASDS

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.