Factsheet for Zm00001d043787_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03470	Sorghum	cytosol	89.96	89.96
Os01t0692100-01	Rice	mitochondrion	68.62	69.2
Zm00001d043789_P003	Maize	cytosol	72.8	68.77
TraesCS3A01G260800.1	Wheat	cytosol	67.78	68.64
TraesCS3B01G234100.1	Wheat	cytosol	67.36	68.22
HORVU3Hr1G064320.1	Barley	cytosol	66.53	67.09
TraesCS3D01G261100.1	Wheat	cytosol	65.27	65.82
Zm00001d043795_P001	Maize	extracellular	64.44	65.53
Zm00001d029702_P001	Maize	cytosol, mitochondrion, plastid	30.96	57.81
Zm00001d024963_P001	Maize	extracellular	55.65	57.33
Zm00001d029699_P002	Maize	extracellular	56.07	56.3
Zm00001d048558_P001	Maize	cytosol	50.21	52.86
Zm00001d029707_P001	Maize	cytosol, extracellular	50.21	52.63
Zm00001d011154_P001	Maize	mitochondrion	51.88	52.32
Zm00001d029708_P001	Maize	extracellular	50.21	51.95
Zm00001d029706_P001	Maize	extracellular	43.1	51.5
Zm00001d048560_P001	Maize	cytosol	51.88	51.45
Zm00001d029703_P001	Maize	cytosol	51.46	50.2
Zm00001d048559_P001	Maize	cytosol, extracellular	48.12	48.94
Zm00001d049657_P001	Maize	cytosol	47.7	47.5
Zm00001d029704_P001	Maize	cytosol, extracellular	53.14	46.69
Zm00001d034356_P001	Maize	cytosol, extracellular	42.68	45.54
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.68	45.33
Zm00001d029701_P001	Maize	plastid	53.56	44.6
Zm00001d018809_P001	Maize	extracellular	41.0	44.14
Zm00001d036951_P001	Maize	cytosol	39.75	42.22
Zm00001d013693_P001	Maize	cytosol	38.91	41.15
Zm00001d027557_P001	Maize	cytosol	43.51	40.94

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100285806	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:B6U9Z8	EMBL:EU974063
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0016740	InterPro:GST_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	ProteinID:ONM39030.1
PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF318
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000182F143	EnsemblPlantsGene:Zm00001d043787	EnsemblPlants:Zm00001d043787_P001
EnsemblPlants:Zm00001d043787_T001	:	:	:	:	:

Description

glutathione transferase20Glutathione S-transferase GSTU6

Coordinates

chr3:+:210237044..210238359

Molecular Weight (calculated)

26083.0 Da

IEP (calculated)

5.791

GRAVY (calculated)

-0.074

Length

239 amino acids

Sequence
(BLAST)

001: MAAAGGGVGD SELRLLGKSS SPWVFRVRVA LGLRGLSYEY IEEDLGNKSE LLLRSNPVHK KVPVLIHGGR PVCESLVILQ YVDEIWRGTG PPLLPSDPYD
101: RATARFWAAY VDDKFFPAFS ALFRSRTDEQ RAEALQNALL VAETLERAFT ECSRGKAFFG GDAVGLVDVT LGSHPIWIRA VDQTAGTNLL DGARFPDLAA
201: WAERFMALGA VNEVVPDAGK LLEQYRASRA KWTAAADSS

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.