Factsheet for Zm00001d018809_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G578300.1	Wheat	cytosol	73.42	75.81
HORVU2Hr1G124310.1	Barley	cytosol	72.97	75.35
TraesCS2D01G589500.1	Wheat	cytosol	71.17	73.49
TraesCS2B01G609500.1	Wheat	cytosol	70.72	73.02
GSMUA_Achr9P26040_001	Banana	cytosol	68.92	68.61
Zm00001d034356_P001	Maize	cytosol, extracellular	68.47	67.86
Os09t0367700-01	Rice	cytosol	69.37	66.09
GSMUA_Achr9P26030_001	Banana	cytosol	66.22	65.33
GSMUA_Achr10P...	Banana	cytosol	65.32	65.02
Zm00001d036951_P001	Maize	cytosol	63.51	62.67
GSMUA_Achr9P26050_001	Banana	cytosol	59.91	60.73
VIT_04s0079g00360.t01	Wine grape	cytosol	58.56	59.09
GSMUA_Achr9P26020_001	Banana	cytosol	55.86	54.15
Zm00001d013693_P001	Maize	cytosol	52.7	51.77
KRH72918	Soybean	cytosol	51.35	51.58
KRH17272	Soybean	cytosol	51.35	51.58
Solyc02g081240.1.1	Tomato	cytosol	49.1	49.1
PGSC0003DMT400094585	Potato	cytosol	48.65	48.87
Zm00001d029702_P001	Maize	cytosol, mitochondrion, plastid	26.58	46.09
Zm00001d048558_P001	Maize	cytosol	45.95	44.93
Zm00001d029699_P002	Maize	extracellular	47.3	44.12
Zm00001d029707_P001	Maize	cytosol, extracellular	44.14	42.98
Zm00001d029708_P001	Maize	extracellular	44.59	42.86
Zm00001d024963_P001	Maize	extracellular	44.14	42.24
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.89	41.33
Zm00001d043787_P001	Maize	cytosol, extracellular	44.14	41.0
Zm00001d029706_P001	Maize	extracellular	36.49	40.5
Zm00001d043789_P003	Maize	cytosol	45.5	39.92
Zm00001d011154_P001	Maize	mitochondrion	41.89	39.24
Zm00001d029703_P001	Maize	cytosol	43.24	39.18
Zm00001d043795_P001	Maize	extracellular	41.44	39.15
Zm00001d049657_P001	Maize	cytosol	40.99	37.92
Zm00001d048560_P001	Maize	cytosol	40.54	37.34
Zm00001d048559_P001	Maize	cytosol, extracellular	39.19	37.02
Zm00001d027557_P001	Maize	cytosol	41.44	36.22
Zm00001d029704_P001	Maize	cytosol, extracellular	43.69	35.66
Zm00001d029701_P001	Maize	plastid	42.79	33.1
GSMUA_Achr9P26060_001	Banana	cytosol	60.36	30.8
GSMUA_Achr9P26080_001	Banana	cytosol	59.01	29.11
GSMUA_Achr9P26070_001	Banana	cytosol	62.16	17.56

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:541991	UniProt:B8A3K0	EMBL:BT056142
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0006950	GO:GO:0008150	GO:GO:0009635	GO:GO:0016740	GO:GO:0032991	GO:GO:0042803
GO:GO:0043234	GO:GO:0046982	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	ProteinID:ONM51379.1	PFAM:PF13410	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF480	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000189D711
EnsemblPlantsGene:Zm00001d018809	EnsemblPlants:Zm00001d018809_P001	EnsemblPlants:Zm00001d018809_T001	SEG:seg	:	:

Description

glutathione transferase6 glutathione transferase6

Coordinates

chr7:-:5834880..5838491

Molecular Weight (calculated)

25119.2 Da

IEP (calculated)

5.438

GRAVY (calculated)

-0.097

Length

222 amino acids

Sequence
(BLAST)

001: MAAAAEVVLL DFWVSPFGQR CRIALAEKGV AYEYREQDLL DKGELLLRSN PIHKKIPVLL HAGRPVCESL VILQYIDEAW PDVAPLLPKD DPYARAQARF
101: WADYIDKKIY DSQTRLWKFE GEAREQAKKD LVEVLETLEG ELADKPFFGG GALGFVDVAL VPFTSWFLAY EKLGGFSIQE HCPRIVAWAA RCRERESVAK
201: ALSDPAKVLE FVQFLQSKFG AK

Best Arabidopsis Sequence Match ( AT1G78380.1 )
(BLAST)

001: MANEVILLDF WPSMFGMRTR IALREKGVEF EYREEDLRNK SPLLLQMNPI HKKIPVLIHN GKPVNESIIQ VQYIDEVWSH KNPILPSDPY LRAQARFWAD
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE

Arabidopsis Description

GSTU19GSTU19 [Source:UniProtKB/TrEMBL;Acc:A0A178W4K6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.