Factsheet for Zm00001d048560_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94619	Sorghum	cytosol	85.06	86.13
Os10t0527400-01	Rice	cytosol	64.73	65.27
Zm00001d029702_P001	Maize	cytosol, mitochondrion, plastid	33.2	62.5
Zm00001d029699_P002	Maize	extracellular	61.0	61.76
Zm00001d029703_P001	Maize	cytosol	60.17	59.18
Os10t0527601-00	Rice	cytosol	62.66	58.75
Zm00001d024963_P001	Maize	extracellular	55.6	57.76
Zm00001d048559_P001	Maize	cytosol, extracellular	55.19	56.6
Zm00001d029707_P001	Maize	cytosol, extracellular	50.21	53.07
Zm00001d048558_P001	Maize	cytosol	49.79	52.86
Zm00001d029708_P001	Maize	extracellular	49.79	51.95
Zm00001d043787_P001	Maize	cytosol, extracellular	51.45	51.88
Zm00001d029701_P001	Maize	plastid	61.41	51.57
Zm00001d011154_P001	Maize	mitochondrion	50.62	51.48
Zm00001d029706_P001	Maize	extracellular	42.32	51.0
Zm00001d043795_P001	Maize	extracellular	48.55	49.79
Zm00001d043789_P003	Maize	cytosol	50.62	48.22
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.74	45.78
Zm00001d049657_P001	Maize	cytosol	45.23	45.42
Zm00001d034356_P001	Maize	cytosol, extracellular	39.83	42.86
Zm00001d029704_P001	Maize	cytosol, extracellular	48.13	42.65
Zm00001d027557_P001	Maize	cytosol	43.57	41.34
Zm00001d036951_P001	Maize	cytosol	38.17	40.89
Zm00001d018809_P001	Maize	extracellular	37.34	40.54
Zm00001d013693_P001	Maize	cytosol	36.51	38.94

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:A0A1D6PMP0	ProteinID:AQL10342.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0016740	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF02798	PFAM:PF13410	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF478	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI000189D76F	EnsemblPlantsGene:Zm00001d048560	EnsemblPlants:Zm00001d048560_P001	EnsemblPlants:Zm00001d048560_T001	SEG:seg	:

Description

Glutathione S-transferase U16

Coordinates

chr9:-:158683140..158684127

Molecular Weight (calculated)

26598.2 Da

IEP (calculated)

5.811

GRAVY (calculated)

0.014

Length

241 amino acids

Sequence
(BLAST)

001: MAGDGELKLL GMWASPFVLR ARLALSFKGL KYEYVEEEIF GNKSELLLES NPVHKKVPVL IHNGKAICES QIIVQYISEV YDGTGPSLLP VGAYDRAVAR
101: FWAAYVDDKV FSSFMMMIMG KTDDEKAEGR KQLFAAAETL EGALKECSCS KGRPRPFFGG DSVGYVDIAL GGFVAWVQTR DLLSGLEHFD ADKTPLLATW
201: LERFCALNET KAVMPDVMKL LEFSKKRQAQ ADAAAAAVVL R

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.