CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011154_P001	Maize	mitochondrion	87.55	89.03
TraesCS2D01G504900.1	Wheat	cytosol, golgi	64.32	64.32
TraesCS2B01G532600.1	Wheat	cytosol	64.73	57.35
EER92032	Sorghum	cytosol	56.02	57.2
Os07t0168300-01	Rice	cytosol	55.6	57.02
HORVU2Hr1G111840.5	Barley	cytosol	63.07	56.93
EER94597	Sorghum	cytosol	53.94	56.77
TraesCS2A01G504300.2	Wheat	cytosol	64.73	56.52
EER94599	Sorghum	cytosol	54.77	56.17
EES03469	Sorghum	cytosol	54.77	55.46
EER94598	Sorghum	cytosol	52.28	55.26
EER94613	Sorghum	cytosol	53.53	55.13
EER94618	Sorghum	cytosol	49.79	55.05
OQU92262	Sorghum	cytosol	55.19	54.73
EER94606	Sorghum	cytosol	52.7	53.81
EES03470	Sorghum	cytosol	53.11	53.56
EER94605	Sorghum	cytosol	52.28	53.39
KXG39035	Sorghum	cytosol	53.11	53.33
EER94614	Sorghum	cytosol	53.94	53.28
EER94619	Sorghum	cytosol	52.28	52.94
EES08965	Sorghum	endoplasmic reticulum	51.04	52.79
EER94615	Sorghum	cytosol	52.28	52.72
EER94607	Sorghum	cytosol	51.45	52.32
EER94596	Sorghum	cytosol	50.21	52.16
EER94604	Sorghum	cytosol	51.04	51.46
EES13278	Sorghum	cytosol	53.53	50.59
EER92030	Sorghum	cytosol	49.79	50.42
OQU86987	Sorghum	cytosol	53.53	50.39
EES00905	Sorghum	cytosol	48.96	49.79
EES03468	Sorghum	cytosol	51.04	49.4
OQU92261	Sorghum	cytosol	54.77	46.64
EER97476	Sorghum	cytosol	42.74	45.18
EER92034	Sorghum	endoplasmic reticulum	43.15	44.83
EER92035	Sorghum	cytosol	44.81	44.81
EER90776	Sorghum	cytosol	41.49	44.25
EER92036	Sorghum	cytosol	41.08	42.13
EER91171	Sorghum	cytosol	41.08	42.13
EER90777	Sorghum	cytosol	39.83	41.92
EER93341	Sorghum	cytosol	37.76	41.55
EER89978	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.76	39.91
OQU89319	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.85	38.01
EER95876	Sorghum	cytosol	29.88	32.43

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:8075007	UniProt:C5XN16	EnsemblPlants:EES00904
ProteinID:EES00904	ProteinID:EES00904.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740
GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF13410	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF484
EnsemblPlantsGene:SORBI_3003G187000	SUPFAM:SSF47616	SUPFAM:SSF52833	unigene:Sbi.8221	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A847B1
RefSeq:XP_002455784.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:50563518..50564817

Molecular Weight (calculated)

25478.4 Da

IEP (calculated)

4.864

GRAVY (calculated)

0.042

Length

241 amino acids

Sequence
(BLAST)

001: MATTAGAGGA GKLKLLGAWP SPFVNRVRVA LHLKGLEYEN VEEDLTNKSD QLLASNPVHK KVPVLLHGDT PVSESLVIVE YLDDAFPGAG QALLPADPYE
101: RAVARFWAAY VDGKLHGMMV KAILGATEEE RAAATADALA AMETLEGAFA ECSGGKEFFA GDEPGYLDVV LGGFIGWLRA WDKVGGVKLL DGGRRTPRLA
201: AWAERFAALD VARDVIPDPD HIAEFAKVLQ ARSAAAAAAG N

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.