Factsheet for TraesCS2D01G504900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G532600.1	Wheat	cytosol	98.34	87.13
TraesCS2A01G504300.2	Wheat	cytosol	96.68	84.42
HORVU2Hr1G111840.5	Barley	cytosol	90.46	81.65
Zm00001d011154_P001	Maize	mitochondrion	63.9	64.98
EES00904	Sorghum	mitochondrion	64.32	64.32
Os07t0168300-01	Rice	cytosol	57.68	59.15
TraesCS1D01G190100.1	Wheat	cytosol	56.85	58.3
TraesCS6D01G127700.1	Wheat	cytosol	55.19	57.83
TraesCS1D01G191100.1	Wheat	cytosol, extracellular	55.6	57.51
TraesCS1D01G190600.1	Wheat	cytosol	54.36	57.46
TraesCS6D01G127800.1	Wheat	cytosol	54.77	57.39
TraesCS3D01G261100.1	Wheat	cytosol	56.43	57.38
TraesCS1D01G190000.1	Wheat	cytosol	55.6	56.78
TraesCS4D01G295400.1	Wheat	cytosol	55.19	56.6
TraesCS7D01G044500.1	Wheat	cytosol	53.53	56.33
TraesCS2D01G224700.1	Wheat	cytosol	55.19	55.42
TraesCS7D01G054400.1	Wheat	cytosol	53.11	55.17
TraesCS1D01G014500.1	Wheat	cytosol	53.11	55.17
TraesCS3D01G025800.1	Wheat	cytosol	53.11	54.24
TraesCS1D01G189900.1	Wheat	cytosol	52.7	54.04
TraesCS1D01G017000.1	Wheat	cytosol	51.87	53.88
TraesCS3D01G430200.1	Wheat	cytosol	51.87	53.42
TraesCS4D01G225800.1	Wheat	cytosol	51.45	53.22
TraesCS7D01G131600.1	Wheat	cytosol	53.53	53.09
TraesCS5D01G027500.1	Wheat	cytosol	51.45	52.77
TraesCS5D01G027300.1	Wheat	cytosol	51.45	52.77
TraesCS1D01G189800.2	Wheat	cytosol	51.87	52.74
TraesCS1D01G017200.1	Wheat	cytosol	45.64	51.64
TraesCS3D01G429600.1	Wheat	cytosol	48.96	51.53
TraesCS1D01G190200.1	Wheat	cytosol	50.62	51.48
TraesCS3D01G429800.1	Wheat	cytosol	49.79	51.28
TraesCS3D01G429700.1	Wheat	cytosol, golgi	49.38	51.07
TraesCS1D01G190300.1	Wheat	endoplasmic reticulum	49.79	50.85
TraesCS1D01G190500.1	Wheat	cytosol	48.55	50.21
TraesCS3D01G130700.1	Wheat	cytosol	51.04	49.8
TraesCS3D01G429900.1	Wheat	cytosol	48.55	49.58
TraesCS7D01G465400.1	Wheat	extracellular	48.13	49.36
TraesCS1D01G189600.1	Wheat	cytosol	48.13	48.95
TraesCS7D01G030800.1	Wheat	mitochondrion	48.96	48.36
TraesCS5D01G200100.1	Wheat	cytosol	45.64	47.62
TraesCS7D01G030700.1	Wheat	cytosol, golgi	47.72	47.33
TraesCS5D01G432700.1	Wheat	cytosol	40.25	47.09
TraesCS3D01G490700.1	Wheat	mitochondrion	48.13	46.96
TraesCS1D01G189700.1	Wheat	mitochondrion	52.28	45.32
TraesCS5D01G432600.1	Wheat	cytosol	40.66	44.14
TraesCS7D01G128600.1	Wheat	cytosol	22.41	43.9
TraesCS3D01G369600.1	Wheat	cytosol	39.42	42.41
TraesCS2D01G589500.1	Wheat	cytosol	34.85	39.07
TraesCS5D01G384400.1	Wheat	cytosol	34.85	37.84
TraesCS7D01G050800.1	Wheat	plastid	46.47	36.36
TraesCS2D01G589300.1	Wheat	cytosol	30.71	33.04
TraesCS2D01G545400.1	Wheat	cytosol	47.3	31.41
TraesCS2D01G589400.1	Wheat	cytosol, plastid	30.71	29.37
TraesCS2D01G589600.1	Wheat	cytosol	31.54	28.46

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF13410
PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF484	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS2D01G504900	EnsemblPlants:TraesCS2D01G504900.1	TIGR:cd03058	TIGR:cd03185
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:599003000..599003810

Molecular Weight (calculated)

25720.7 Da

IEP (calculated)

5.297

GRAVY (calculated)

0.154

Length

241 amino acids

Sequence
(BLAST)

001: MAAGAAGGGS DELKLLGVWV SPFVHRVQVA LHLKGLTGYE YAEEDLTNKS DLLLASNPVH TKVPVLLHAG KPVCESMLIV QYLDEAFPGS GPALLPADPH
101: DRAVARFWAA YADDQFFASW IKAFVGTTDE ERAAATEAAV AALQKMEGAF GECSKGKAFF GGDGPGYVDI ALGGFVAWIR AFHAVASVNL LDAARTPLLA
201: AWAERFAALD AAKEVIPDVD RIAEFAKHDL LPLLQKLHPK N

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.