Factsheet for TraesCS3D01G429700.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G437400.1	Wheat	cytosol	93.56	93.56
TraesCS3B01G471500.1	Wheat	cytosol	90.13	90.13
TraesCS3D01G429600.1	Wheat	cytosol	87.98	89.52
TraesCS3D01G429800.1	Wheat	cytosol	86.27	85.9
TraesCS3D01G430200.1	Wheat	cytosol	80.69	80.34
TraesCS3D01G429900.1	Wheat	cytosol	81.12	80.08
TraesCS4D01G225800.1	Wheat	cytosol	67.38	67.38
TraesCS1D01G190300.1	Wheat	endoplasmic reticulum	64.38	63.56
Zm00001d049657_P001	Maize	cytosol	65.24	63.33
TraesCS1D01G190500.1	Wheat	cytosol	63.09	63.09
TraesCS7D01G465400.1	Wheat	extracellular	63.09	62.55
TraesCS1D01G190200.1	Wheat	cytosol	61.8	60.76
Os10t0530400-01	Rice	plasma membrane	62.66	60.58
EES13278	Sorghum	cytosol	63.95	58.43
EER92030	Sorghum	cytosol	58.37	57.14
TraesCS6D01G127700.1	Wheat	cytosol	54.51	55.22
TraesCS6D01G127800.1	Wheat	cytosol	54.08	54.78
Zm00001d029706_P001	Maize	extracellular	46.35	54.0
TraesCS1D01G014500.1	Wheat	cytosol	52.79	53.02
TraesCS1D01G017200.1	Wheat	cytosol	47.21	51.64
TraesCS1D01G189800.2	Wheat	cytosol	52.36	51.48
TraesCS7D01G054400.1	Wheat	cytosol	51.07	51.29
TraesCS1D01G191100.1	Wheat	cytosol, extracellular	51.07	51.07
TraesCS1D01G190100.1	Wheat	cytosol	51.5	51.06
TraesCS1D01G189900.1	Wheat	cytosol	51.5	51.06
TraesCS1D01G017000.1	Wheat	cytosol	50.64	50.86
TraesCS1D01G190600.1	Wheat	cytosol	49.36	50.44
TraesCS7D01G030800.1	Wheat	mitochondrion	51.93	49.59
TraesCS2D01G504900.1	Wheat	cytosol, golgi	51.07	49.38
TraesCS3D01G261100.1	Wheat	cytosol	50.21	49.37
TraesCS4D01G295400.1	Wheat	cytosol	49.79	49.36
TraesCS1D01G190000.1	Wheat	cytosol	49.36	48.73
TraesCS3D01G490700.1	Wheat	mitochondrion	51.5	48.58
TraesCS7D01G030700.1	Wheat	cytosol, golgi	50.64	48.56
TraesCS5D01G200100.1	Wheat	cytosol	47.64	48.05
TraesCS7D01G044500.1	Wheat	cytosol	47.21	48.03
TraesCS3D01G025800.1	Wheat	cytosol	48.07	47.46
TraesCS7D01G131600.1	Wheat	cytosol	49.36	47.33
TraesCS5D01G027500.1	Wheat	cytosol	46.78	46.38
TraesCS5D01G027300.1	Wheat	cytosol	46.78	46.38
TraesCS1D01G189600.1	Wheat	cytosol	46.78	45.99
TraesCS3D01G130700.1	Wheat	cytosol	46.78	44.13
TraesCS2D01G589500.1	Wheat	cytosol	39.48	42.79
TraesCS2D01G224700.1	Wheat	cytosol	43.78	42.5
TraesCS5D01G432700.1	Wheat	cytosol	36.91	41.75
TraesCS1D01G189700.1	Wheat	mitochondrion	49.36	41.37
TraesCS5D01G384400.1	Wheat	cytosol	38.63	40.54
TraesCS3D01G369600.1	Wheat	cytosol	37.77	39.29
TraesCS5D01G432600.1	Wheat	cytosol	36.91	38.74
TraesCS7D01G050800.1	Wheat	plastid	50.64	38.31
TraesCS7D01G128600.1	Wheat	cytosol	19.31	36.59
TraesCS2D01G589300.1	Wheat	cytosol	33.48	34.82
TraesCS2D01G589400.1	Wheat	cytosol, plastid	34.33	31.75
TraesCS2D01G589600.1	Wheat	cytosol	33.91	29.59
TraesCS2D01G545400.1	Wheat	cytosol	42.06	27.0

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF02798
PFAM:PF13410	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF200	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS3D01G429700	EnsemblPlants:TraesCS3D01G429700.1	TIGR:cd03058	TIGR:cd03185
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:544339230..544339931

Molecular Weight (calculated)

25305.5 Da

IEP (calculated)

4.753

GRAVY (calculated)

0.195

Length

233 amino acids

Sequence
(BLAST)

001: MAGEGDVKLL GTVVSPFAIR VRMALHLKGV SYEYLEQDLF DKGELLLDSN PVHKKVPVLI HVGRPICESL AIVEYVDEVW ADGASLLPAD PYGRAVARFW
101: AAYIDDKLFP AWIGILRAAT EEDRAEKLDA ALAVVGPLED ALAQCSGGKD YFAGDSVGYL DIALGCNLFW FEALHEMFGV TVIDAGRTPR LAAWAERFVE
201: TEAAKKAAPL MKSMVDYAGK LRSMWAAAAA AAK

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.