CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94619	Sorghum	cytosol	72.94	66.81
EER94613	Sorghum	cytosol	70.18	65.38
Os10t0527400-01	Rice	cytosol	70.64	64.44
OQU92262	Sorghum	cytosol	70.64	63.37
EER92032	Sorghum	cytosol	67.89	62.71
EER94615	Sorghum	cytosol	67.89	61.92
KXG39035	Sorghum	cytosol	66.06	60.0
EER94607	Sorghum	cytosol	65.14	59.92
EER94614	Sorghum	cytosol	66.97	59.84
EER94605	Sorghum	cytosol	64.68	59.75
EER94606	Sorghum	cytosol	63.3	58.47
EER94597	Sorghum	cytosol	60.09	57.21
Os10t0527601-00	Rice	cytosol	65.14	55.25
EER94598	Sorghum	cytosol	55.5	53.07
OQU92261	Sorghum	cytosol	67.89	52.3
EER94604	Sorghum	cytosol	56.88	51.88
EES03469	Sorghum	cytosol	56.42	51.68
EES08965	Sorghum	endoplasmic reticulum	55.05	51.5
EES03470	Sorghum	cytosol	55.96	51.05
EER94599	Sorghum	cytosol	54.59	50.64
EES03468	Sorghum	cytosol	57.8	50.6
EER92030	Sorghum	cytosol	55.05	50.42
EER94596	Sorghum	cytosol	53.21	50.0
EES00904	Sorghum	mitochondrion	55.05	49.79
OQU86987	Sorghum	cytosol	54.59	46.48
EES13278	Sorghum	cytosol	51.83	44.31
EES00905	Sorghum	cytosol	47.71	43.88
EER92034	Sorghum	endoplasmic reticulum	46.33	43.53
EER90776	Sorghum	cytosol	44.5	42.92
EER97476	Sorghum	cytosol	44.5	42.54
EER92035	Sorghum	cytosol	46.79	42.32
EER92036	Sorghum	cytosol	44.04	40.85
EER93341	Sorghum	cytosol	39.45	39.27
EER90777	Sorghum	cytosol	40.83	38.86
EER91171	Sorghum	cytosol	40.83	37.87
EER89978	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.45	37.72
OQU89319	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.61	37.1
EER95876	Sorghum	cytosol	35.32	34.68

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:C5WUJ8	EnsemblPlants:EER94618	ProteinID:EER94618
ProteinID:EER94618.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF02798
PFAM:PF13410	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF478	EnsemblPlantsGene:SORBI_3001G319100
SUPFAM:SSF47616	SUPFAM:SSF52833	unigene:Sbi.12746	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A830B8	RefSeq:XP_002467620.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:60717647..60718433

Molecular Weight (calculated)

24125.3 Da

IEP (calculated)

5.374

GRAVY (calculated)

-0.031

Length

218 amino acids

Sequence
(BLAST)

001: MAGGDELKLL GFWGSPFVLR ARLALSFKGL SYEYVEEDLK NKSQLLLQSN PVHKKVPVLI HNGKPVCETK IIMQYLDEVY GPSLLPADPY DRAMARFWAA
101: YIDDKLLGSL MMMSMGKTDE EKAEGRKQSS DAVETLERAL KECSKGKPFF GGDSVGYVDV VLGGFVAWVH LIDRLTGLNV FDSSKTPLLA AWLESFGSLD
201: AAMAVMPDVQ RLVELSAR

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.