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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G200100.1 Wheat cytosol 73.42 75.32
TraesCS5A01G190900.1 Wheat cytosol 72.57 74.46
TraesCS5B01G192400.1 Wheat cytosol 72.57 74.46
HORVU5Hr1G058000.8 Barley cytosol 67.93 69.4
PGSC0003DMT400058268 Potato cytosol 25.74 55.96
EER92036 Sorghum cytosol 52.32 52.77
EER92035 Sorghum cytosol 53.59 52.7
EER92034 Sorghum endoplasmic reticulum 51.05 52.16
EES08965 Sorghum endoplasmic reticulum 49.79 50.64
EER92032 Sorghum cytosol 50.21 50.42
CDX93432 Canola cytosol 47.68 49.78
Bra019940.1-P Field mustard cytosol 47.26 49.34
CDY37985 Canola cytosol 47.26 49.34
EES00904 Sorghum mitochondrion 49.79 48.96
EER94615 Sorghum cytosol 49.37 48.95
EER94599 Sorghum cytosol 48.52 48.94
AT1G10370.1 Thale cress cytosol 46.84 48.9
CDY37984 Canola cytosol 46.84 48.9
CDY07793 Canola cytosol 32.91 48.75
VIT_01s0026g01340.t01 Wine grape cytosol 47.68 48.71
Bra031708.1-P Field mustard cytosol 46.41 48.46
CDY34896 Canola cytosol 46.41 48.46
EES03470 Sorghum cytosol 48.52 48.12
AT1G10360.1 Thale cress cytosol 45.99 48.02
EER94618 Sorghum cytosol 43.88 47.71
VIT_01s0026g01330.t01 Wine grape cytosol 46.41 47.41
EER94598 Sorghum cytosol 45.57 47.37
EER94597 Sorghum cytosol 45.57 47.16
EES03469 Sorghum cytosol 46.84 46.64
EER94606 Sorghum cytosol 46.41 46.61
Solyc05g026220.1.1 Tomato cytosol 31.22 46.25
EER94596 Sorghum cytosol 45.15 46.12
EER94614 Sorghum cytosol 47.26 45.9
KXG39035 Sorghum cytosol 46.41 45.83
EER94613 Sorghum cytosol 45.15 45.73
Solyc05g006750.2.1 Tomato cytosol 43.88 45.41
EER92030 Sorghum cytosol 45.57 45.38
Solyc05g006730.2.1 Tomato mitochondrion 43.04 45.33
EES03468 Sorghum cytosol 47.26 44.98
Solyc05g006740.2.1 Tomato cytosol 40.51 44.86
OQU92262 Sorghum cytosol 45.99 44.86
PGSC0003DMT400040670 Potato cytosol 43.46 44.59
EER94619 Sorghum cytosol 44.73 44.54
AT1G27130.1 Thale cress cytosol 42.19 44.05
KRH69404 Soybean nucleus 43.04 43.97
CDY65968 Canola cytosol 42.62 43.91
EER94605 Sorghum cytosol 43.46 43.64
CDY16220 Canola cytosol 41.77 43.61
AT1G59700.1 Thale cress cytosol 43.04 43.59
KRH69402 Soybean nucleus 42.62 43.53
PGSC0003DMT400095775 Potato cytosol 35.44 43.52
CDY56091 Canola cytosol 42.19 43.48
EER94607 Sorghum cytosol 43.46 43.46
VIT_01s0026g01380.t01 Wine grape endoplasmic reticulum 47.68 43.3
PGSC0003DMT400058271 Potato cytosol 42.19 43.29
Bra024659.1-P Field mustard cytosol 41.35 43.17
Bra007890.1-P Field mustard cytosol 41.77 43.04
CDY14704 Canola cytosol 41.35 42.98
Bra003970.1-P Field mustard cytosol 42.19 42.73
CDY23533 Canola cytosol 42.19 42.73
CDY48383 Canola cytosol 42.19 42.73
CDY40288 Canola cytosol, plastid 40.93 42.73
CDY11636 Canola mitochondrion 41.35 42.61
PGSC0003DMT400019934 Potato cytosol 39.24 42.47
Bra016250.1-P Field mustard cytosol 41.77 42.31
CDY11635 Canola cytosol 41.77 42.31
CDY38775 Canola cytosol 41.77 42.31
Bra016252.1-P Field mustard cytosol 40.93 42.17
KRH74740 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 41.77 42.13
AT1G69930.1 Thale cress cytosol 41.35 41.88
KRH74742 Soybean nucleus 41.35 41.88
CDY28452 Canola cytosol 34.6 41.84
Solyc05g026210.1.1 Tomato nucleus 40.08 41.3
CDY45140 Canola cytosol 21.94 40.94
Bra012422.1-P Field mustard cytosol 34.18 40.91
EER97476 Sorghum cytosol 39.24 40.79
CDX77247 Canola cytosol 38.4 40.62
CDY30898 Canola cytosol 40.08 40.6
CDY45138 Canola cytosol 37.97 40.54
Bra007889.1-P Field mustard mitochondrion 35.44 40.38
CDY56090 Canola mitochondrion 35.44 40.38
AT1G59670.1 Thale cress cytosol 39.66 40.34
CDY25824 Canola cytosol 34.18 40.3
CDY30896 Canola cytosol 39.24 40.26
OQU86987 Sorghum cytosol 43.46 40.23
Bra027840.1-P Field mustard cytosol 39.66 40.17
Bra016253.1-P Field mustard cytosol 38.4 39.91
CDY11637 Canola mitochondrion 38.4 39.91
CDY38773 Canola cytosol 38.4 39.91
EER94604 Sorghum cytosol 40.08 39.75
KRH69403 Soybean extracellular 22.36 39.55
AT1G27140.1 Thale cress cytosol 40.51 39.51
EER90776 Sorghum cytosol 37.55 39.38
EER91171 Sorghum cytosol 38.4 38.72
OQU92261 Sorghum cytosol 45.99 38.52
CDY38774 Canola cytosol 40.93 38.04
EER93341 Sorghum cytosol 35.02 37.9
EES13278 Sorghum cytosol 40.51 37.65
AT1G69920.1 Thale cress cytosol 39.66 37.01
KRG99195 Soybean cytosol 21.94 36.62
EER89978 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 35.02 36.4
EER90777 Sorghum cytosol 35.02 36.24
EER95876 Sorghum cytosol 33.76 36.04
OQU89319 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 33.33 35.75
Bra027842.1-P Field mustard cytosol 23.21 35.71
CDY23534 Canola cytosol, mitochondrion, plastid 26.58 34.43
PGSC0003DMT400091065 Potato cytosol 43.46 31.79
GSMUA_Achr1P23320_001 Banana endoplasmic reticulum, plasma membrane 34.18 28.03
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10EntrezGene:8076688UniProt:C5XN17EnsemblPlants:EES00905
ProteinID:EES00905ProteinID:EES00905.1GO:GO:0003674GO:GO:0003824GO:GO:0004364GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006749
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009407GO:GO:0009987GO:GO:0016740
GO:GO:0019748InterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987
PFAM:PF13410PFAM:PF13417PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF487
EnsemblPlantsGene:SORBI_3003G187100SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sfUniParc:UPI0001A847B2RefSeq:XP_002455785.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr3:+:50578796..50580673
Molecular Weight (calculated)
25556.7 Da
IEP (calculated)
6.516
GRAVY (calculated)
0.111
Length
237 amino acids
Sequence
(BLAST)
001: MASGDAAAVR VVGGWASPFV MRVCVALRLK GVAYEFLQEE PGKKSALLLA SNPVHKQIPV LLHGGRPVCE SLVILQYVDE AFSGAATPRI LPADPYDRAV
101: HRFWADYADA KLPTALRTLR GMIDGDKAEA AEQVAAALAQ LEEAFTACSK GQRFFAGDDI GFLDIVLGSY VGWFRAAERI TAQAVLDETR TPRLAAWAAR
201: FCGHEAIRDV MPDAGRLVEF GEALRAALAA NANAQRM
Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)
001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA
Arabidopsis Description
GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.