Factsheet for Solyc05g006740.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058271	Potato	cytosol	94.86	87.88
Solyc05g006730.2.1	Tomato	mitochondrion	71.5	68.0
VIT_01s0026g01340.t01	Wine grape	cytosol	70.09	64.66
VIT_01s0026g01330.t01	Wine grape	cytosol	68.69	63.36
AT1G10370.1	Thale cress	cytosol	60.75	57.27
CDY34896	Canola	cytosol	60.28	56.83
Bra019940.1-P	Field mustard	cytosol	60.28	56.83
Bra031708.1-P	Field mustard	cytosol	60.28	56.83
AT1G10360.1	Thale cress	cytosol	59.81	56.39
CDX93432	Canola	cytosol	59.81	56.39
CDY37984	Canola	cytosol	59.35	55.95
CDY37985	Canola	cytosol	59.35	55.95
Solyc05g026220.1.1	Tomato	cytosol	38.78	51.88
CDY07793	Canola	cytosol	38.78	51.88
Solyc05g026210.1.1	Tomato	nucleus	55.14	51.3
Solyc05g006750.2.1	Tomato	cytosol	54.21	50.66
KRG99195	Soybean	cytosol	33.18	50.0
Os10t0481300-01	Rice	cytosol	47.66	50.0
Os10t0525800-00	Rice	cytosol	48.13	47.25
GSMUA_Achr1P03800_001	Banana	cytosol	49.07	46.26
GSMUA_Achr5P10350_001	Banana	cytosol	50.47	45.76
GSMUA_Achr5P10340_001	Banana	cytosol	49.07	45.26
EER92036	Sorghum	cytosol	49.07	44.68
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.73	44.44
GSMUA_Achr5P10360_001	Banana	cytosol	49.53	44.35
Os10t0525500-01	Rice	cytosol, plastid	29.44	43.75
Solyc07g056430.2.1	Tomato	cytosol	28.5	43.57
Solyc07g056450.2.1	Tomato	cytosol	28.04	43.17
EER92034	Sorghum	endoplasmic reticulum	46.73	43.1
TraesCS1B01G194900.1	Wheat	cytosol	46.73	42.19
TraesCS5D01G200100.1	Wheat	cytosol	44.86	41.56
TraesCS5A01G190900.1	Wheat	cytosol	44.86	41.56
EER92035	Sorghum	cytosol	46.73	41.49
TraesCS5B01G192400.1	Wheat	cytosol	43.93	40.69
EES00905	Sorghum	cytosol	44.86	40.51
TraesCS1D01G189600.1	Wheat	cytosol	44.86	40.51
TraesCS1A01G187000.1	Wheat	cytosol	44.86	40.51
HORVU1Hr1G049090.2	Barley	cytosol	44.86	40.34
Os10t0525400-01	Rice	cytosol, plastid	45.33	39.75
Solyc07g056510.2.1	Tomato	cytosol	40.65	39.73
Solyc07g056470.2.1	Tomato	plastid	40.65	39.55
Solyc07g056480.2.1	Tomato	cytosol, plastid	40.19	39.09
Solyc07g056420.2.1	Tomato	extracellular	39.72	38.64
Zm00001d027557_P001	Maize	cytosol	45.79	38.58
HORVU5Hr1G058000.8	Barley	cytosol	41.12	37.93
Solyc12g011310.1.1	Tomato	plastid	38.78	37.9
HORVU1Hr1G049070.1	Barley	cytosol	44.86	37.07
Solyc07g056460.2.1	Tomato	plastid	37.85	36.82
Solyc10g007620.1.1	Tomato	cytosol	37.38	36.53
Solyc07g056440.2.1	Tomato	cytosol	37.85	36.49
Solyc12g011300.1.1	Tomato	cytosol	37.38	36.36
Solyc10g007640.2.1	Tomato	cytosol	37.38	36.2
Solyc07g056490.2.1	Tomato	extracellular	36.45	35.62
Solyc12g011320.1.1	Tomato	cytosol	35.98	35.16
Solyc02g081240.1.1	Tomato	cytosol	35.51	34.23
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	36.45	26.99

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987
GO:GO:0016740	GO:GO:0019748	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:K4BWK0	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF487	SUPFAM:SSF47616	SUPFAM:SSF52833	EnsemblPlantsGene:Solyc05g006740.2
EnsemblPlants:Solyc05g006740.2.1	InterPro:Thioredoxin-like_sf	UniParc:UPI000276567D	SEG:seg	:	:

Description

No Description!

Coordinates

chr5:+:1379095..1381005

Molecular Weight (calculated)

24042.0 Da

IEP (calculated)

5.120

GRAVY (calculated)

-0.067

Length

214 amino acids

Sequence
(BLAST)

001: MRPRIALNVK SVCYDFLEEQ LSSKSDLLLI SNPVYKKIPV LIHDGKSICE SLNIVQYIDE KWTNSGPSIL PLDPYDRAIA RFWACYIDDK WFPLFRSFAV
101: AQGEDAIKTA LEPVFDGLVL LEDAFKNCSK GKKFFGGDKI GYVDIALGCF LGWMRVIEKM NNVTLLDEAK TPGLYNWAED FCADSSVKDV MPETNKLAEA
201: AKNLIPKIRA NASS

Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)

001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA

Arabidopsis Description

GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.