CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 3
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031708.1-P	Field mustard	cytosol	100.0	100.0
CDY07793	Canola	cytosol	65.2	92.5
AT1G10360.1	Thale cress	cytosol	85.02	85.02
CDY37985	Canola	cytosol	73.57	73.57
CDX93432	Canola	cytosol	72.69	72.69
CDY37984	Canola	cytosol	72.25	72.25
PGSC0003DMT400040670	Potato	cytosol	62.56	61.47
PGSC0003DMT400058271	Potato	cytosol	61.67	60.61
Solyc05g006730.2.1	Tomato	mitochondrion	59.91	60.44
Solyc05g006740.2.1	Tomato	cytosol	56.83	60.28
CDY16220	Canola	cytosol	52.86	52.86
KRG99195	Soybean	cytosol	33.04	52.82
CDY45140	Canola	cytosol	29.52	52.76
CDX79258	Canola	cytosol	25.99	52.68
Os10t0481300-01	Rice	cytosol	47.14	52.45
Os10t0525800-00	Rice	cytosol	49.78	51.83
CDY14704	Canola	cytosol	51.98	51.75
VIT_01s0026g01380.t01	Wine grape	endoplasmic reticulum	59.47	51.72
CDY40288	Canola	cytosol, plastid	51.54	51.54
GSMUA_Achr1P03800_001	Banana	cytosol	51.1	51.1
CDY45138	Canola	cytosol	49.78	50.9
CDX77247	Canola	cytosol	50.22	50.89
CDY30898	Canola	cytosol	51.1	49.57
CDY28452	Canola	cytosol	42.73	49.49
TraesCS1B01G194900.1	Wheat	cytosol	51.54	49.37
CDY30896	Canola	cytosol	50.22	49.35
Os10t0525500-01	Rice	cytosol, plastid	31.28	49.31
GSMUA_Achr5P10350_001	Banana	cytosol	51.1	49.15
TraesCS1A01G187000.1	Wheat	cytosol	51.1	48.95
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.46	48.89
GSMUA_Achr5P10340_001	Banana	cytosol	49.78	48.71
EER92036	Sorghum	cytosol	50.22	48.51
HORVU1Hr1G049090.2	Barley	cytosol	50.66	48.32
CDY11636	Canola	mitochondrion	48.9	48.26
CDY65968	Canola	cytosol	48.9	48.26
GSMUA_Achr5P10360_001	Banana	cytosol	50.66	48.12
TraesCS5D01G200100.1	Wheat	cytosol	48.9	48.05
CDY11635	Canola	cytosol	49.34	47.86
EER92034	Sorghum	endoplasmic reticulum	48.9	47.84
CDY56091	Canola	cytosol	48.46	47.83
EER92035	Sorghum	cytosol	50.66	47.72
TraesCS1D01G189600.1	Wheat	cytosol	49.78	47.68
TraesCS5B01G192400.1	Wheat	cytosol	48.46	47.62
TraesCS5A01G190900.1	Wheat	cytosol	48.46	47.62
CDY38775	Canola	cytosol	48.9	47.44
CDY25824	Canola	cytosol	41.85	47.26
CDY48383	Canola	cytosol	48.46	47.01
CDY23533	Canola	cytosol	48.02	46.58
EES00905	Sorghum	cytosol	48.46	46.41
Os10t0525400-01	Rice	cytosol, plastid	49.34	45.9
CDY56090	Canola	mitochondrion	41.85	45.67
CDY11637	Canola	mitochondrion	45.37	45.18
CDY38773	Canola	cytosol	45.37	45.18
HORVU5Hr1G058000.8	Barley	cytosol	45.81	44.83
HORVU1Hr1G049070.1	Barley	cytosol	50.66	44.4
CDY38774	Canola	cytosol	49.34	43.92
CDX79261	Canola	cytosol	40.97	42.47
CDY14615	Canola	cytosol	40.97	42.47
CDX68016	Canola	cytosol	40.97	42.47
CDX79260	Canola	cytosol	40.53	42.4
Zm00001d027557_P001	Maize	cytosol	47.14	42.13
CDY26861	Canola	cytosol	40.53	42.01
CDX68017	Canola	cytosol	40.09	41.94
CDX68018	Canola	cytosol	39.65	41.28
CDX88439	Canola	cytosol	39.65	41.28
CDX88438	Canola	cytosol	39.65	41.28
CDX79259	Canola	cytosol	39.65	41.1
CDY26267	Canola	cytosol	38.33	40.47
CDX68019	Canola	cytosol	39.21	40.45
CDX81810	Canola	cytosol	38.77	40.18
CDX81807	Canola	cytosol	38.33	39.91
CDY26266	Canola	cytosol	38.33	39.73
CDY48475	Canola	cytosol	29.52	39.65
CDX96787	Canola	cytosol	37.89	39.27
CDY48476	Canola	cytosol	37.89	39.27
CDX81808	Canola	cytosol	37.89	39.27
CDX83922	Canola	cytosol	37.89	39.27
CDY21758	Canola	cytosol	37.89	39.27
CDY58045	Canola	cytosol	38.33	38.84
CDY25833	Canola	cytosol	37.89	38.39
CDY25831	Canola	cytosol	37.89	38.39
CDX81809	Canola	cytosol	36.56	37.9
CDY21756	Canola	cytosol	36.56	37.9
CDX88440	Canola	cytosol	36.56	37.73
CDX87452	Canola	cytosol	36.56	37.73
CDX88441	Canola	cytosol	36.56	37.56
CDX87952	Canola	cytosol	37.44	37.44
CDY21757	Canola	cytosol	36.12	37.44
CDY12324	Canola	cytosol	37.0	37.0
CDY23534	Canola	cytosol, mitochondrion, plastid	28.63	35.52
CDY48477	Canola	cytosol	28.63	34.03
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	36.12	28.37
CDX68020	Canola	cytosol	3.96	25.0

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:A0A078HB05	EnsemblPlants:CDY34896	ProteinID:CDY34896
ProteinID:CDY34896.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00057463001
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF00043	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF487
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00025431BD	SEG:seg	:

Description

BnaA09g48220DBnaA09g48220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HB05]

Coordinates

chrLK032342:+:373836..374993

Molecular Weight (calculated)

25896.1 Da

IEP (calculated)

5.692

GRAVY (calculated)

-0.160

Length

227 amino acids

Sequence
(BLAST)

001: MVTGDVKLIG SWASVFVMRA RIALNLKSIS YEFLQETYGT KSELLLKSNP VHKKIPVLIH DDKPVCESNI IVQYIDEAWS SYGLSILPSQ PYDRAIARFW
101: AAYVDDKWFI ALRSILTARG EEEKKAAIAE VEERTDHLEK AFIECSNGKP FFNGDHIGYL DIALGSFLGW WKVVELDANH ILLDETKTPS LFQWAERFCN
201: DPDVKPLMPE TTKLAEFARK LFPKPQA

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.