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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:cytosol
MultiLoc:cytosol
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87452 Canola cytosol 77.83 78.18
CDX88440 Canola cytosol 76.47 76.82
CDX79258 Canola cytosol 37.1 73.21
CDX68016 Canola cytosol 69.23 69.86
CDX79261 Canola cytosol 69.23 69.86
CDY14615 Canola cytosol 68.33 68.95
CDY26861 Canola cytosol 68.33 68.95
CDX81807 Canola cytosol 66.52 67.43
CDY21758 Canola cytosol 66.52 67.12
CDY26266 Canola cytosol 66.52 67.12
CDY48476 Canola cytosol 65.61 66.21
CDY21757 Canola cytosol 65.61 66.21
CDX81808 Canola cytosol 65.16 65.75
CDY48475 Canola cytosol 49.77 65.09
CDY26267 Canola cytosol 62.9 64.65
CDX81809 Canola cytosol 63.8 64.38
CDX81810 Canola cytosol 63.8 64.38
CDX68018 Canola cytosol 63.35 64.22
CDX79259 Canola cytosol 62.9 63.47
CDY21756 Canola cytosol 61.99 62.56
CDX88439 Canola cytosol 61.09 61.93
CDX88438 Canola cytosol 61.09 61.93
CDX68019 Canola cytosol 59.73 60.0
CDX79260 Canola cytosol 58.82 59.91
CDX68017 Canola cytosol 58.37 59.45
Solyc12g011310.1.1 Tomato plastid 58.82 59.36
CDX96787 Canola cytosol 58.82 59.36
CDX83922 Canola cytosol 58.82 59.36
Solyc07g056490.2.1 Tomato extracellular 58.37 58.9
KRH43843 Soybean cytosol 57.92 58.45
KRH13622 Soybean cytosol 44.8 57.89
CDY58045 Canola cytosol 58.37 57.59
PGSC0003DMT400038054 Potato endoplasmic reticulum 57.01 57.53
KRH02498 Soybean cytosol 56.56 57.34
CDY25833 Canola cytosol 57.92 57.14
CDY25831 Canola cytosol 57.47 56.7
KRH13620 Soybean cytosol 56.11 56.11
CDY48477 Canola cytosol 48.42 56.02
KRH13625 Soybean cytosol 54.75 55.25
PGSC0003DMT400071059 Potato cytosol 54.75 55.0
KRH43845 Soybean cytosol 55.2 54.95
VIT_10s0003g04250.t01 Wine grape cytosol 23.53 54.74
VIT_19s0093g00370.t01 Wine grape cytosol 29.86 54.55
VIT_19s0093g00350.t01 Wine grape cytosol 54.3 54.3
VIT_19s0093g00400.t01 Wine grape cytosol 53.39 53.39
KRH43846 Soybean cytosol 47.51 51.47
VIT_19s0093g00320.t01 Wine grape cytosol 51.13 51.13
CDX87952 Canola cytosol 52.04 50.66
CDY12324 Canola cytosol 51.58 50.22
CDX68020 Canola cytosol 7.69 47.22
CDY45140 Canola cytosol 26.24 45.67
CDY07793 Canola cytosol 29.86 41.25
CDY45138 Canola cytosol 37.56 37.39
CDX77247 Canola cytosol 37.56 37.05
CDY30898 Canola cytosol 38.91 36.75
CDY34896 Canola cytosol 37.56 36.56
CDX93432 Canola cytosol 36.65 35.68
CDY56090 Canola mitochondrion 33.48 35.58
CDY37985 Canola cytosol 36.2 35.24
CDY37984 Canola cytosol 36.2 35.24
CDY30896 Canola cytosol 36.65 35.06
CDY16220 Canola cytosol 35.75 34.8
CDY56091 Canola cytosol 36.2 34.78
CDY40288 Canola cytosol, plastid 35.29 34.36
CDY14704 Canola cytosol 35.29 34.21
CDY65968 Canola cytosol 35.29 33.91
CDY11636 Canola mitochondrion 34.84 33.48
CDY38773 Canola cytosol 34.39 33.33
CDY11635 Canola cytosol 35.29 33.33
CDY38775 Canola cytosol 35.29 33.33
CDY11637 Canola mitochondrion 34.39 33.33
CDY23533 Canola cytosol 34.84 32.91
CDY48383 Canola cytosol 34.84 32.91
CDY28452 Canola cytosol 28.51 32.14
CDY25824 Canola cytosol 28.51 31.34
CDY38774 Canola cytosol 34.39 29.8
CDY23534 Canola cytosol, mitochondrion, plastid 20.81 25.14
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10EnsemblPlants:CDX88441ProteinID:CDX88441ProteinID:CDX88441.1
ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00147983001InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF02798PFAM:PF13410
PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF479SUPFAM:SSF47616SUPFAM:SSF52833
InterPro:Thioredoxin-like_sfUniParc:UPI0004EC8056::::
Description
BnaC06g38850D
Coordinates
chrLK031855:-:1022121..1023637
Molecular Weight (calculated)
25742.3 Da
IEP (calculated)
5.456
GRAVY (calculated)
-0.223
Length
221 amino acids
Sequence
(BLAST)
001: MADEVILLNF WPSIFGMRTT IALEEKGVKY EYREEEDVIN NKTRLLLEMN PVHKKIPVLI HNGKPVCESI VQVQYIDEIW PEKNPFLPKD PYQRAQALFW
101: ADFIEKKVCV CGRRVWTTKG EELEAANKEF LELLKILQSE LGDKPYFGGD KFGFVDIVLI GFFCWFPAYE KFGNYSMESE CSKLMAWGKR CMQRDSVANS
201: LPDPERVIGY VLHLKKLFGL E
Best Arabidopsis Sequence Match ( AT1G78360.1 )
(BLAST)
001: MAAEVILLGF WPSMFGMRTM IALEEKGVKY EYREEDVINN KSPLLLEMNP IHKTIPVLIH NGKPVLESLI QIQYIDEVWS DNNSFLPSDP YHRAQALFWA
101: DFIDKKLYVC GRKTWATKGE ELEAANKEFI EILKTLQCEL GEKPYFGGDK FGFVDIVLIG FYSWFPAYQK FGNFSIEPEC LKLIAWGKRC MQRESVAKAL
201: PDSEKVVGYV LQLKKLYGIE
Arabidopsis Description
ATGSTU21glutathione S-transferase TAU 21 [Source:TAIR;Acc:AT1G78360]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.