Skip to main content
crop-pal logo
Wine grape
Search for another protein from :
Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • vacuole 5
  • extracellular 4
  • endoplasmic reticulum 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:cytosol
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_01s0026g01380.t01
VIT_06s0004g05670.t01
VIT_06s0004g05680.t01
VIT_06s0004g05700.t01
VIT_06s0004g05710.t01
VIT_10s0003g04250.t01
VIT_14s0060g02170.t01
VIT_19s0093g00320.t01
VIT_19s0093g00350.t01
VIT_19s0093g00370.t01
VIT_19s0093g00400.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G17180.1 VIT_06s0004g05670.t01 AT2G29420.1 21798944
AT1G17180.1 VIT_06s0004g05680.t01 AT2G29420.1 21798944
AT1G17180.1 VIT_06s0004g05700.t01 AT2G29420.1 21798944
AT1G17180.1 VIT_06s0004g05710.t01 AT2G29420.1 21798944
AT1G17180.1 VIT_14s0060g02170.t01 AT2G29420.1 21798944
AT1G17190.1 VIT_01s0026g01380.t01 AT1G10360.1 21798944
AT1G17190.1 VIT_06s0004g05670.t01 AT2G29490.1 21798944
AT1G17190.1 VIT_06s0004g05680.t01 AT2G29490.1 21798944
AT1G17190.1 VIT_06s0004g05700.t01 AT2G29490.1 21798944
AT1G17190.1 VIT_06s0004g05710.t01 AT2G29490.1 21798944
AT1G17190.1 VIT_14s0060g02170.t01 AT2G29490.1 21798944
AT1G78340.1 VIT_06s0004g05670.t01 AT2G29490.1 21798944
AT1G78340.1 VIT_06s0004g05680.t01 AT2G29490.1 21798944
AT1G78340.1 VIT_06s0004g05700.t01 AT2G29490.1 21798944
AT1G78340.1 VIT_06s0004g05710.t01 AT2G29490.1 21798944
AT1G78340.1 VIT_14s0060g02170.t01 AT2G29490.1 21798944
AT1G78380.1 VIT_10s0003g04250.t01 AT1G17190.1 21798944
AT1G78380.1 VIT_19s0093g00320.t01 AT1G17190.1 21798944
AT1G78380.1 VIT_19s0093g00350.t01 AT1G17190.1 21798944
AT1G78380.1 VIT_19s0093g00370.t01 AT1G17190.1 21798944
AT1G78380.1 VIT_19s0093g00400.t01 AT1G17190.1 21798944
AT1G78380.1 VIT_06s0004g05670.t01 AT2G29490.1 21798944
AT1G78380.1 VIT_06s0004g05680.t01 AT2G29490.1 21798944
AT1G78380.1 VIT_06s0004g05700.t01 AT2G29490.1 21798944
AT1G78380.1 VIT_06s0004g05710.t01 AT2G29490.1 21798944
AT1G78380.1 VIT_14s0060g02170.t01 AT2G29490.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_19s0093g00350.t01 Wine grape cytosol 95.93 95.93
VIT_10s0003g04250.t01 Wine grape cytosol 33.94 78.95
VIT_19s0093g00320.t01 Wine grape cytosol 78.73 78.73
VIT_19s0093g00370.t01 Wine grape cytosol 40.27 73.55
VIT_19s0015g02560.t01 Wine grape cytosol 34.39 69.09
VIT_19s0015g02880.t01 Wine grape cytosol 64.25 68.27
VIT_19s0093g00310.t01 Wine grape cytosol 66.06 66.67
VIT_19s0015g02590.t01 Wine grape cytosol 62.9 66.51
VIT_19s0015g02890.t01 Wine grape cytosol 65.61 66.21
VIT_00s0240g00020.t01 Wine grape cytosol 35.29 66.1
VIT_19s0093g00110.t01 Wine grape cytosol 65.16 65.75
VIT_19s0015g02700.t01 Wine grape cytosol 64.71 65.3
VIT_19s0015g02830.t01 Wine grape cytosol 35.29 65.0
VIT_19s0093g00150.t01 Wine grape cytosol 64.25 64.84
VIT_19s0015g02730.t01 Wine grape cytosol 64.25 64.84
VIT_19s0093g00260.t01 Wine grape cytosol 62.44 63.01
PGSC0003DMT400038054 Potato endoplasmic reticulum 61.99 62.56
Solyc07g056490.2.1 Tomato extracellular 61.99 62.56
VIT_00s0240g00050.t01 Wine grape cytosol 61.99 62.56
KRH43843 Soybean cytosol 61.54 62.1
VIT_19s0093g00190.t01 Wine grape cytosol 61.54 62.1
VIT_19s0027g00460.t01 Wine grape cytosol 62.44 61.88
VIT_19s0015g02680.t01 Wine grape cytosol 61.09 61.64
VIT_19s0093g00220.t01 Wine grape cytosol 62.44 60.79
AT1G17180.1 Thale cress cytosol 60.63 60.63
CDY21758 Canola cytosol 59.73 60.27
Solyc12g011310.1.1 Tomato plastid 59.73 60.27
Bra026684.1-P Field mustard cytosol 59.73 60.27
CDX81808 Canola cytosol 59.28 59.82
Bra026681.1-P Field mustard cytosol 59.28 59.82
PGSC0003DMT400071059 Potato cytosol 59.28 59.55
Bra026680.1-P Field mustard cytosol 58.82 59.36
CDY48476 Canola cytosol 58.37 58.9
CDY21757 Canola cytosol 58.37 58.9
AT1G17170.1 Thale cress cytosol 57.92 58.72
Bra025994.1-P Field mustard cytosol 57.92 58.45
CDY26266 Canola cytosol 57.92 58.45
Bra003645.1-P Field mustard cytosol 53.85 58.33
CDX68017 Canola cytosol 57.01 58.06
CDX81809 Canola cytosol 57.47 57.99
VIT_19s0093g00160.t01 Wine grape cytosol 54.75 57.89
KRH13622 Soybean cytosol 44.8 57.89
CDX79260 Canola cytosol 56.56 57.6
CDX81810 Canola cytosol 57.01 57.53
Bra035031.1-P Field mustard cytosol 57.01 57.27
CDX87452 Canola cytosol 57.01 57.27
CDX88440 Canola cytosol 56.56 56.82
CDY48475 Canola cytosol 43.44 56.8
CDY26861 Canola cytosol 56.11 56.62
CDX81807 Canola cytosol 55.66 56.42
Bra016615.1-P Field mustard cytosol 55.66 56.16
Bra026679.1-P Field mustard cytosol 55.66 56.16
CDY21756 Canola cytosol 55.66 56.16
CDX83922 Canola cytosol 55.66 56.16
CDX96787 Canola cytosol 55.66 56.16
AT1G17190.1 Thale cress cytosol 55.66 55.91
AT1G78370.1 Thale cress cytosol 54.75 55.76
CDX79261 Canola cytosol 55.2 55.71
CDX68016 Canola cytosol 55.2 55.71
CDY14615 Canola cytosol 55.2 55.71
Bra003644.1-P Field mustard cytosol 55.2 55.71
KRH02498 Soybean cytosol 54.75 55.5
Bra003646.1-P Field mustard cytosol 54.75 55.5
AT1G78360.1 Thale cress endoplasmic reticulum 55.2 55.45
KRH43845 Soybean cytosol 55.66 55.41
Bra025995.1-P Field mustard cytosol 53.85 55.35
AT1G78380.1 Thale cress cytosol 54.75 55.25
CDX79259 Canola cytosol 54.75 55.25
KRH13625 Soybean cytosol 54.75 55.25
VIT_19s0015g02690.t01 Wine grape cytosol 40.72 55.21
CDX68018 Canola cytosol 54.3 55.05
CDY26267 Canola cytosol 53.39 54.88
AT1G78340.1 Thale cress cytosol 53.85 54.59
KRH13620 Soybean cytosol 53.85 53.85
CDX88441 Canola cytosol 53.39 53.39
CDX88439 Canola cytosol 52.04 52.75
CDX88438 Canola cytosol 52.04 52.75
Bra035029.1-P Field mustard cytosol 52.04 52.75
Bra025993.1-P Field mustard cytosol 52.49 52.73
KRH43846 Soybean cytosol 47.96 51.96
VIT_04s0079g00360.t01 Wine grape cytosol 51.13 51.36
CDY48477 Canola cytosol 43.89 50.79
Bra034977.1-P Field mustard cytosol 49.77 48.46
CDY12324 Canola cytosol 49.77 48.46
CDX87952 Canola cytosol 49.32 48.02
VIT_19s0093g00290.t01 Wine grape mitochondrion 27.6 47.66
AT3G43800.1 Thale cress cytosol 48.87 47.58
VIT_19s0015g02610.t01 Wine grape cytosol 65.16 44.04
Bra003648.1-P Field mustard cytosol 28.96 42.95
VIT_01s0026g01340.t01 Wine grape cytosol 38.91 37.07
VIT_01s0026g01330.t01 Wine grape cytosol 37.1 35.34
VIT_01s0026g01380.t01 Wine grape endoplasmic reticulum 37.56 31.8
CDX68020 Canola cytosol 4.07 25.0
Protein Annotations
Gene3D:1.20.1050.10EntrezGene:100254975wikigene:100254975MapMan:18.8.1.4Gene3D:3.40.30.10EMBL:AM488627
ProteinID:CAN75492ProteinID:CAN75492.1ProteinID:CCB57192ProteinID:CCB57192.1UniProt:F6HR84EMBL:FN596009
GO:GO:0003674GO:GO:0003824GO:GO:0004364GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006749GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009407GO:GO:0009987GO:GO:0016740GO:GO:0019748InterPro:GST_C
InterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987EntrezGene:LOC100254975
wikigene:LOC100254975PFAM:PF00043PFAM:PF02798PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260
PANTHER:PTHR11260:SF479SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sfUniParc:UPI00015CCCA1ArrayExpress:VIT_19s0093g00400
EnsemblPlantsGene:VIT_19s0093g00400EnsemblPlants:VIT_19s0093g00400.t01unigene:Vvi.25638RefSeq:XP_002276792RefSeq:XP_002276792.1RefSeq:XP_019072450.1
Description
No Description!
Coordinates
chr19:+:17210245..17211420
Molecular Weight (calculated)
25342.8 Da
IEP (calculated)
6.519
GRAVY (calculated)
-0.125
Length
221 amino acids
Sequence
(BLAST)
001: MANSDQIVLL DFFPSVFGIR VRLALAAKGI EYDGKEEDLI GGKSSLLLKM NPVHKKIPVL IHNGKPICES LIIVEYIDEV WKDRCPLLPS DPYQKAKAKF
101: WADFIDKMVY PCSKKLWTAK GEEQEASKKE FLDRIKLLEG ELKSYPYFGG ESLGFLDIAF LPLYSRFYTF EAFGNFSIEA ECPKLVAWGK RCMEEEFVSR
201: SLPHQHKIYD LVVEFTKNVG I
Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)
001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
Arabidopsis Description
GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.