Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79260 | Canola | cytosol | 89.4 | 89.4 |
| CDX68017 | Canola | cytosol | 88.94 | 88.94 |
| Bra003645.1-P | Field mustard | cytosol | 83.41 | 88.73 |
| AT1G78380.1 | Thale cress | cytosol | 74.19 | 73.52 |
| AT1G78340.1 | Thale cress | cytosol | 68.66 | 68.35 |
| AT1G17180.1 | Thale cress | cytosol | 68.66 | 67.42 |
| AT1G78360.1 | Thale cress | endoplasmic reticulum | 65.9 | 65.0 |
| AT1G17170.1 | Thale cress | cytosol | 64.52 | 64.22 |
| KRH43843 | Soybean | cytosol | 62.67 | 62.1 |
| AT1G78320.1 | Thale cress | cytosol | 62.21 | 61.36 |
| Solyc07g056490.2.1 | Tomato | extracellular | 61.75 | 61.19 |
| Solyc12g011310.1.1 | Tomato | plastid | 60.83 | 60.27 |
| PGSC0003DMT400038054 | Potato | endoplasmic reticulum | 60.37 | 59.82 |
| KRH13625 | Soybean | cytosol | 60.37 | 59.82 |
| AT1G17190.1 | Thale cress | cytosol | 58.99 | 58.18 |
| KRH13622 | Soybean | cytosol | 45.16 | 57.31 |
| KRH43845 | Soybean | cytosol | 58.06 | 56.76 |
| AT1G53680.1 | Thale cress | cytosol | 58.53 | 56.7 |
| PGSC0003DMT400071059 | Potato | cytosol | 57.14 | 56.36 |
| VIT_19s0093g00350.t01 | Wine grape | cytosol | 56.22 | 55.2 |
| KRH02498 | Soybean | cytosol | 55.3 | 55.05 |
| VIT_19s0093g00400.t01 | Wine grape | cytosol | 55.76 | 54.75 |
| KRH13620 | Soybean | cytosol | 54.84 | 53.85 |
| VIT_19s0093g00370.t01 | Wine grape | cytosol | 29.49 | 52.89 |
| VIT_10s0003g04250.t01 | Wine grape | cytosol | 23.04 | 52.63 |
| VIT_19s0093g00320.t01 | Wine grape | cytosol | 53.46 | 52.49 |
| AT3G43800.1 | Thale cress | cytosol | 52.07 | 49.78 |
| KRH43846 | Soybean | cytosol | 46.08 | 49.02 |
| AT1G27130.1 | Thale cress | cytosol | 43.78 | 41.85 |
| AT1G10370.1 | Thale cress | cytosol | 41.01 | 39.21 |
| AT1G10360.1 | Thale cress | cytosol | 40.09 | 38.33 |
| AT1G59700.1 | Thale cress | cytosol | 40.55 | 37.61 |
| AT1G59670.1 | Thale cress | cytosol | 40.09 | 37.34 |
| AT1G27140.1 | Thale cress | cytosol | 40.55 | 36.21 |
| AT1G69930.1 | Thale cress | cytosol | 36.87 | 34.19 |
| AT1G69920.1 | Thale cress | cytosol | 39.17 | 33.46 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | PDB:5ECH | PDB:5ECI | PDB:5ECK |
| PDB:5ECL | PDB:5ECM | PDB:5ECN | PDB:5ECO | PDB:5ECP | PDB:5ECQ |
| PDB:5ECR | PDB:5ECS | EntrezGene:844173 | MapMan:9.5.1.5.3 | ProteinID:AAF71798.1 | ProteinID:AEE36098.1 |
| ArrayExpress:AT1G78370 | EnsemblPlantsGene:AT1G78370 | RefSeq:AT1G78370 | TAIR:AT1G78370 | RefSeq:AT1G78370-TAIR-G | EnsemblPlants:AT1G78370.1 |
| TAIR:AT1G78370.1 | Symbol:ATGSTU20 | EMBL:AY087026 | EMBL:AY136338 | EMBL:BT000168 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004364 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006749 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009407 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009628 | GO:GO:0009636 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009987 | GO:GO:0016740 |
| GO:GO:0019748 | GO:GO:0019899 | GO:GO:0040007 | GO:GO:0040008 | GO:GO:0048046 | GO:GO:2000030 |
| InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | RefSeq:NP_177958.1 |
| PFAM:PF02798 | PFAM:PF13410 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0006339 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS50404 | PFscan:PS50405 |
| PANTHER:PTHR11260 | PANTHER:PTHR11260:SF479 | UniProt:Q8L7C9 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI00000484AD | SEG:seg | : | : | : | : |
Description
GSTU20Glutathione S-transferase U20 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7C9]
Coordinates
chr1:-:29484120..29485389
Molecular Weight (calculated)
25007.6 Da
IEP (calculated)
5.479
GRAVY (calculated)
-0.496
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLPILLDY WPSMFGMRAR VALREKGVEF EYREEDFSNK SPLLLQSNPI HKKIPVLVHN GKPVCESLNV VQYVDEAWPE KNPFFPSDPY GRAQARFWAD
101: FVDKKFTDAQ FKVWGKKGEE QEAGKKEFIE AVKILESELG DKPYFGGDSF GYVDISLITF SSWFQAYEKF GNFSIESESP KLIAWAKRCM EKESVSKSLP
201: DSEKIVAYAA EYRKNNL
101: FVDKKFTDAQ FKVWGKKGEE QEAGKKEFIE AVKILESELG DKPYFGGDSF GYVDISLITF SSWFQAYEKF GNFSIESESP KLIAWAKRCM EKESVSKSLP
201: DSEKIVAYAA EYRKNNL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.