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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:cytosol
MultiLoc:cytosol
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY25833 Canola cytosol 91.52 91.52
Bra038140.1-P Field mustard cytosol 91.52 91.52
CDY58045 Canola cytosol 90.62 90.62
CDY25831 Canola cytosol 90.18 90.18
AT1G17180.1 Thale cress cytosol 60.71 61.54
AT1G78380.1 Thale cress cytosol 59.38 60.73
AT1G17170.1 Thale cress cytosol 58.93 60.55
AT1G78360.1 Thale cress endoplasmic reticulum 57.59 58.64
AT1G78370.1 Thale cress cytosol 56.7 58.53
AT1G78340.1 Thale cress cytosol 55.8 57.34
AT1G78320.1 Thale cress cytosol 53.12 54.09
AT1G17190.1 Thale cress cytosol 51.79 52.73
Solyc12g011320.1.1 Tomato cytosol 47.77 48.86
AT3G43800.1 Thale cress cytosol 47.32 46.7
PGSC0003DMT400020098 Potato cytosol 46.88 41.34
AT1G59700.1 Thale cress cytosol 41.96 40.17
AT1G59670.1 Thale cress cytosol 40.18 38.63
AT1G27130.1 Thale cress cytosol 38.39 37.89
AT1G10360.1 Thale cress cytosol 37.95 37.44
AT1G10370.1 Thale cress cytosol 37.5 37.0
AT1G69930.1 Thale cress cytosol 35.27 33.76
AT1G27140.1 Thale cress cytosol 36.61 33.74
AT1G69920.1 Thale cress cytosol 36.16 31.89
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10EntrezGene:841805ProteinID:AAG51968.1ProteinID:AEE32981.1
ArrayExpress:AT1G53680EnsemblPlantsGene:AT1G53680RefSeq:AT1G53680TAIR:AT1G53680RefSeq:AT1G53680-TAIR-GEnsemblPlants:AT1G53680.1
TAIR:AT1G53680.1Symbol:ATGSTU28GO:GO:0003674GO:GO:0003824GO:GO:0004364GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829
GO:GO:0006749GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009407GO:GO:0009636
GO:GO:0009987GO:GO:0016740GO:GO:0019748GO:GO:0046686InterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987RefSeq:NP_175772.1PFAM:PF02798PFAM:PF13410
PO:PO:0000005PO:PO:0000256PO:PO:0000262PO:PO:0000293PO:PO:0007103PO:PO:0007611
PO:PO:0007616PO:PO:0009005PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0020030
PO:PO:0025022PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF479UniProt:Q9C8M3
SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sfUniParc:UPI0000048395SEG:seg:
Description
GSTU28Glutathione S-transferase U28 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M3]
Coordinates
chr1:+:20038320..20039164
Molecular Weight (calculated)
25592.4 Da
IEP (calculated)
5.072
GRAVY (calculated)
-0.421
Length
224 amino acids
Sequence
(BLAST)
001: MGKENSKVVV LDFWASPYAM RTKVALREKG VEFEVQEEDL WNKSELLLKS NPVHKKVPVL IHNNTPISES LIQVQYIDET WTDAASFLPS DPQSRATARF
101: WADYADKTIS FEGGRKIWGN KKGEEQEKGK KEFLESLKVL EAELGDKSYF GGETFGYVDI TLVPFYSWFY ALEKCGDFSV EAECPKIVAW GKRCVERNSV
201: AATLPESEKV YQQVLKLRQI FGVE
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.