Factsheet for AT1G69920.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016252.1-P	Field mustard	cytosol	76.38	84.35
CDY11636	Canola	mitochondrion	75.98	83.91
CDY38774	Canola	cytosol	83.46	83.14
CDY56090	Canola	mitochondrion	66.93	81.73
Bra007889.1-P	Field mustard	mitochondrion	66.93	81.73
AT1G27130.1	Thale cress	cytosol	62.2	69.6
CDY23534	Canola	cytosol, mitochondrion, plastid	46.85	65.03
AT1G27140.1	Thale cress	cytosol	57.09	59.67
AT1G69930.1	Thale cress	cytosol	43.7	47.44
KRH69403	Soybean	extracellular	24.41	46.27
AT1G10370.1	Thale cress	cytosol	41.34	46.26
AT1G10360.1	Thale cress	cytosol	40.94	45.81
KRH74742	Soybean	nucleus	42.13	45.73
AT1G59670.1	Thale cress	cytosol	41.34	45.06
AT1G59700.1	Thale cress	cytosol	41.34	44.87
KRH69402	Soybean	nucleus	40.94	44.83
KRH74740	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.34	44.68
Os10t0525800-00	Rice	cytosol	37.4	43.58
Os10t0481300-01	Rice	cytosol	33.86	42.16
GSMUA_Achr1P03800_001	Banana	cytosol	37.4	41.85
Os10t0525500-01	Rice	cytosol, plastid	23.62	41.67
KRH69404	Soybean	nucleus	37.8	41.38
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.61	41.33
EER92034	Sorghum	endoplasmic reticulum	37.4	40.95
GSMUA_Achr5P10340_001	Banana	cytosol	37.4	40.95
EER92036	Sorghum	cytosol	37.4	40.43
TraesCS1B01G194900.1	Wheat	cytosol	37.4	40.08
Os10t0525400-01	Rice	cytosol, plastid	38.19	39.75
GSMUA_Achr5P10360_001	Banana	cytosol	37.4	39.75
EES00905	Sorghum	cytosol	37.01	39.66
TraesCS5D01G200100.1	Wheat	cytosol	35.83	39.39
TraesCS1D01G189600.1	Wheat	cytosol	36.61	39.24
AT1G78370.1	Thale cress	cytosol	33.46	39.17
AT1G78340.1	Thale cress	cytosol	33.46	38.99
TraesCS5A01G190900.1	Wheat	cytosol	35.43	38.96
TraesCS5B01G192400.1	Wheat	cytosol	35.43	38.96
TraesCS1A01G187000.1	Wheat	cytosol	36.22	38.82
HORVU1Hr1G049090.2	Barley	cytosol	36.22	38.66
EER92035	Sorghum	cytosol	36.61	38.59
GSMUA_Achr5P10350_001	Banana	cytosol	35.43	38.14
HORVU5Hr1G058000.8	Barley	cytosol	34.25	37.5
AT1G78380.1	Thale cress	cytosol	32.28	37.44
Zm00001d027557_P001	Maize	cytosol	37.4	37.4
AT1G53680.1	Thale cress	cytosol	31.89	36.16
HORVU1Hr1G049070.1	Barley	cytosol	36.22	35.52
AT1G17170.1	Thale cress	cytosol	29.92	34.86
AT1G78320.1	Thale cress	cytosol	29.92	34.55
AT1G17180.1	Thale cress	cytosol	29.53	33.94
AT1G17190.1	Thale cress	cytosol	29.13	33.64
AT1G78360.1	Thale cress	endoplasmic reticulum	28.74	33.18
AT3G43800.1	Thale cress	cytosol	27.56	30.84
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	28.74	25.26

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:843328	ProteinID:AAG52553.1	ProteinID:AEE34998.1
ArrayExpress:AT1G69920	EnsemblPlantsGene:AT1G69920	RefSeq:AT1G69920	TAIR:AT1G69920	RefSeq:AT1G69920-TAIR-G	EnsemblPlants:AT1G69920.1
TAIR:AT1G69920.1	Symbol:ATGSTU12	Unigene:At.35363	EMBL:BT010687	EMBL:BT011586	GO:GO:0003674
GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009407	GO:GO:0009636	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	RefSeq:NP_177150.2
PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF487	UniProt:Q6NMS0
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000034F51B	SEG:seg	:

Description

GSTU12Glutathione S-transferase U12 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMS0]

Coordinates

chr1:-:26334250..26335630

Molecular Weight (calculated)

27924.7 Da

IEP (calculated)

8.976

GRAVY (calculated)

-0.102

Length

254 amino acids

Sequence
(BLAST)

001: MLKNKKSDNS LSRDTLQIKK RKKTTMAQNG SNTTVKLIGT WASPFAIRAQ VALHLKSVEH EYVEETDVLK GKSDLLIKSN PIHKKVPVLI HGDVSICESL
101: NIVQYVDESW PSDLSILPTL PSERAFARFW AHFVDGKLFE SIDAVAGAKD DAARMTLAGN LMENLAALEE AFQKSSKGGD FFGGGNIGFV DITVGAIVGP
201: ISVIEAFSGV KFLRPDTTPG LIQWAEKFRA HEAVKPYMPT VAEFIEFAKK KFSV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.